RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 H3BQ06 376 aaPredicted RBP13.01□□□□□ -0.33
SIL1-208ENST00000505945 ARP10275 920 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 IL9P15248 144 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 CTNNB1P35222 781 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 NAPAP54920 295 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 FBXO47Q5MNV8 452 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
SIL1-208ENST00000505945 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 APOA5Q6Q788 366 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 EP400NLQ6ZTU2 488 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 FAM178BQ8IXR5 827 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 MXRA8Q9BRK3 442 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
SIL1-208ENST00000505945 AZI2Q9H6S1 392 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 AGO3Q9H9G7 860 aaKnown RBP13.01□□□□□ -0.33
SIL1-208ENST00000505945 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
SIL1-208ENST00000505945 V9GY48 417 aaPredicted RBP13.01□□□□□ -0.33
SIL1-208ENST00000505945 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
SIL1-208ENST00000505945 CNTNAP5Q8WYK1 1306 aa13□□□□□ -0.33
SIL1-208ENST00000505945 FAM86C2PA6NEL3 165 aa13□□□□□ -0.33
SIL1-208ENST00000505945 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
SIL1-208ENST00000505945 RRN3P2A6NIE6 340 aa13□□□□□ -0.33
SIL1-208ENST00000505945 GRM6O15303 877 aa13□□□□□ -0.33
SIL1-208ENST00000505945 LINC00271P0C7V0 271 aa13□□□□□ -0.33
SIL1-208ENST00000505945 CD52P31358 61 aa13□□□□□ -0.33
SIL1-208ENST00000505945 BMPR1AP36894 532 aa13□□□□□ -0.33
SIL1-208ENST00000505945 ACTR2P61160 394 aa13□□□□□ -0.33
SIL1-208ENST00000505945 MRPS6P82932 125 aaKnown RBP13□□□□□ -0.33
SIL1-208ENST00000505945 TMEM62Q0P6H9 643 aa13□□□□□ -0.33
SIL1-208ENST00000505945 TIGD5Q53EQ6 642 aa13□□□□□ -0.33
SIL1-208ENST00000505945 TMEM31Q5JXX7 168 aa13□□□□□ -0.33
SIL1-208ENST00000505945 RNF20Q5VTR2 975 aa13□□□□□ -0.33
SIL1-208ENST00000505945 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
SIL1-208ENST00000505945 GJD3Q8N144 294 aa13□□□□□ -0.33
SIL1-208ENST00000505945 NEK9Q8TD19 979 aa13□□□□□ -0.33
SIL1-208ENST00000505945 TRAPPC12Q8WVT3 735 aa13□□□□□ -0.33
SIL1-208ENST00000505945 NEK1Q96PY6 1258 aa13□□□□□ -0.33
SIL1-208ENST00000505945 NSUN3Q9H649 340 aaKnown RBP13□□□□□ -0.33
SIL1-208ENST00000505945 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
SIL1-208ENST00000505945 TRPC6Q9Y210 931 aa13□□□□□ -0.33
SIL1-208ENST00000505945 ADGRA3Q8IWK6 1321 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 SMCO2A6NFE2 343 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 PI4K2BG5E9Z4 385 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 ZBTB43O43298 467 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 RB1P06400 928 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 STAT5BP51692 787 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 FUT2Q10981 343 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 BTG3Q14201 252 aaPredicted RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 PLCB4Q15147 1175 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 RTN1Q16799 776 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 ADCK5Q3MIX3 580 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 IER5Q5VY09 327 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 ZNF689Q96CS4 500 aaPredicted RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 PABPC5Q96DU9 382 aaKnown RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 AGO4Q9HCK5 861 aaKnown RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 C11orf16Q9NQ32 467 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
SIL1-208ENST00000505945 TMEM260Q9NX78 707 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 TTC3P53804 2025 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 COL4A6Q14031 1691 aa12.99□□□□□ -0.33
SIL1-208ENST00000505945 NFASCO94856 1347 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 STXBP3O00186 592 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 MEIS1O00470 390 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 GPR37L1O60883 481 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 DGKIO75912 1065 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 FOSP01100 380 aaPredicted RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 SSTR3P32745 418 aaPredicted RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 PLA2G5P39877 138 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 ADCY7P51828 1080 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 CEP55Q53EZ4 464 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 BMP2KLQ5H9B9 411 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 PLPPR4Q7Z2D5 763 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 LINC01599Q8WXQ3 324 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 FAM122AQ96E09 287 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 C11orf84Q9BUA3 381 aaPredicted RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 ANO3Q9BYT9 981 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
SIL1-208ENST00000505945 CLDND1Q9NY35 253 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 PCDHA2Q9Y5H9 948 aa12.98□□□□□ -0.33
SIL1-208ENST00000505945 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 KLF18A0A0U1RQI7 1052 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 M0QZ92 97 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 DDX39AO00148 427 aaKnown RBP12.97□□□□□ -0.33
SIL1-208ENST00000505945 CSPG5O95196 566 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 ATG7O95352 703 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 RPLP2P05387 115 aaKnown RBP12.97□□□□□ -0.33
SIL1-208ENST00000505945 CDC27P30260 824 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 ZNF76P36508 570 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms