RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 LOC102724159A0A0B4J2E5 919 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 KIAA0754O94854 1291 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 PLA2G4BP0C869 781 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 CYP11B2P19099 503 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 STAT3P40763 770 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 GSTO1P78417 241 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 PWP2Q15269 919 aaKnown RBP13.02□□□□□ -0.32
UBE3D-206ENST00000505226 RNF187Q5TA31 235 aaPredicted RBP13.02□□□□□ -0.32
UBE3D-206ENST00000505226 YTHDF3Q7Z739 585 aaKnown RBP13.02□□□□□ -0.32
UBE3D-206ENST00000505226 CYFIP2Q96F07 1278 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 NAGPAQ9UK23 515 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.32
UBE3D-206ENST00000505226 FAM170AA1A519 330 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 UCHL3P15374 230 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 SLC16A2P36021 539 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 GPBP1Q86WP2 473 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 ACTRT1Q8TDG2 376 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 NCAPGQ9BPX3 1015 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 AMACRQ9UHK6 382 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 NR2E1Q9Y466 385 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.33
UBE3D-206ENST00000505226 STRCQ7RTU9 1775 aa13.02□□□□□ -0.33
UBE3D-206ENST00000505226 BTNL10A8MVZ5 291 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 HYIQ5T013 277 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 CD248Q9HCU0 757 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 GEMIN8Q9NWZ8 242 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 FBXL5Q9UKA1 691 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 NOC2LQ9Y3T9 749 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 DAPK3O43293 454 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 AKR1B1P15121 316 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 PON1P27169 355 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 GJB7Q6PEY0 223 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 CCDC13Q8IYE1 715 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 TPCN2Q8NHX9 752 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 CABS1Q96KC9 395 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 LRRC27Q9C0I9 530 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 NENFQ9UMX5 172 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 GCOM1H8Y6P7 765 aaPredicted RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 MED24O75448 989 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 MYZAPP0CAP1 466 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 NR2F2P24468 414 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
UBE3D-206ENST00000505226 PSMC6P62333 389 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 LRIG3Q6UXM1 1119 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 TAF4BQ92750 862 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 VCPKMTQ9H867 229 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 HDAC9Q9UKV0 1011 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
UBE3D-206ENST00000505226 H0YHG0 523 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 DNM1LO00429 736 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 CES2O00748 559 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 GNA14O95837 355 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 SEPT2Q15019 361 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 ALKBH5Q6P6C2 394 aaKnown RBP13□□□□□ -0.33
UBE3D-206ENST00000505226 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 SPATS2Q86XZ4 545 aaKnown RBP13□□□□□ -0.33
UBE3D-206ENST00000505226 OLIG1Q8TAK6 271 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 ZHX3Q9H4I2 956 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
UBE3D-206ENST00000505226 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 NHSQ6T4R5 1651 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 POTEFA5A3E0 1075 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 TTI1O43156 1089 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 TRAPPC3O43617 180 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 LDHCP07864 332 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 POTEIP0CG38 1075 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 SLC12A3P55017 1021 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 POTEGQ6S5H5 508 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
UBE3D-206ENST00000505226 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 SIX2Q9NPC8 291 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 GMNCA6NCL1 334 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L15C9J2P7 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L11C9JVI0 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L18D6R9N7 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L22D6RA61 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L19D6RCP7 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 USP17L20D6RJB6 530 aa13□□□□□ -0.33
UBE3D-206ENST00000505226 RASSF9O75901 435 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms