RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ACTN1P12814 892 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 EIF3BP55884 814 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 SLFN12LQ6IEE8 588 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 CYP4F22Q6NT55 531 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 RSRC2Q7L4I2 434 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 GBP7Q8N8V2 638 aaPredicted RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 MICAL1Q8TDZ2 1067 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 HVCN1Q96D96 273 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 MXD3Q9BW11 206 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 CDHR2Q9BYE9 1310 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 HLFQ16534 295 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 NEK9Q8TD19 979 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 HDAC11Q96DB2 347 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 RPS6KA4O75676 772 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 IFT88Q13099 833 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 BPIFA3Q9BQP9 254 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 NXF1Q9UBU9 619 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 RAD17O75943 681 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 DR1Q01658 176 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 CTTNQ14247 550 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 MMEL1Q495T6 779 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 RAPH1Q70E73 1250 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 NEDD4P46934 1319 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 KCNQ4P56696 695 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 JADE1Q6IE81 842 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 KCTD6Q8NC69 237 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 DIS3Q9Y2L1 958 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 HOXA13P31271 388 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 CUL1Q13616 776 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 PDXDC2PQ6P474 469 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 DARS2Q6PI48 645 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 PROM2Q8N271 834 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 CCNYQ8ND76 341 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 NBPF3Q9H094 633 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 ORC2Q13416 577 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 NNTQ13423 1086 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 ZBTB5O15062 677 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 TMED2Q15363 201 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 RAB44Q7Z6P3 723 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 RTKN2Q8IZC4 609 aa17.84■□□□□ 0.45
PCDHA1-203ENST00000504120 ARHGEF37A1IGU5 675 aa17.83■□□□□ 0.45
PCDHA1-203ENST00000504120 WDR46O15213 610 aaKnown RBP17.83■□□□□ 0.45
PCDHA1-203ENST00000504120 JAK3P52333 1124 aa17.83■□□□□ 0.45
PCDHA1-203ENST00000504120 PPP1R18Q6NYC8 613 aa17.83■□□□□ 0.45
PCDHA1-203ENST00000504120 ABI1Q8IZP0 508 aa17.83■□□□□ 0.45
PCDHA1-203ENST00000504120 GDAQ9Y2T3 454 aa17.83■□□□□ 0.45
PCDHA1-203ENST00000504120 CCDC188H7C350 402 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 CTNND1O60716 968 aaKnown RBP17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 LUC7L3O95232 432 aaKnown RBP17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 S100BP04271 92 aaPredicted RBP17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 CLCN6P51797 869 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 TRIM68Q6AZZ1 485 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 FMO2Q99518 471 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 HAUS8Q9BT25 410 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 ADAMTS1Q9UHI8 967 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 SCINQ9Y6U3 715 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 ARHGEF40Q8TER5 1519 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 PRPSAP2O60256 369 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 BASP1P80723 227 aaKnown RBP17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 EMBQ6PCB8 327 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 NLRP7Q8WX94 980 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 EXOC4Q96A65 974 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 CALN1Q9BXU9 219 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 BAG5Q9UL15 447 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 LRRD1A4D1F6 860 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 LGALS16A8MUM7 142 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 LDHAP00338 332 aaKnown RBP17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 MT-ND3P03897 115 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 RWDD2BP57060 319 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 ALX1Q15699 326 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 ZBTB33Q86T24 672 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 MASTLQ96GX5 879 aa17.83■□□□□ 0.44
PCDHA1-203ENST00000504120 RASGRF2O14827 1237 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 ASNSP08243 561 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 EIF2AK2P19525 551 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 ZNF772Q68DY9 489 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 OR6B2Q6IFH4 312 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 MB21D2Q8IYB1 491 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 CEP72Q9P209 647 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 TYW5A2RUC4 315 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 K7ERI5 159 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 SERPINB6P35237 376 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 DYNLT1P63172 113 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 CYB5R4Q7L1T6 521 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 LRRC4Q9HBW1 653 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 SLC12A6Q9UHW9 1150 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 PVALEFA0A1B0GWK0 134 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 OPHN1O60890 802 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 KPNA2P52292 529 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 CASP8Q14790 479 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 GLE1Q53GS7 698 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 DNAAF3Q8N9W5 541 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 WDR70Q9NW82 654 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 SESN3P58005 492 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 MSTO1Q9BUK6 570 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms