RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ACTRT1Q8TDG2 376 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 CUL5Q93034 780 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 CEP89Q96ST8 783 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 JMJD4Q9H9V9 463 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 MYH4Q9Y623 1939 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 NPHP3-ACAD11A0A0J9YXS1 232 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 CETN3O15182 167 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 FSBPO95073 299 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 ECHS1P30084 290 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 CACNB1Q02641 598 aaPredicted RBP26.84■■□□□ 1.89
DDX41-202ENST00000503078 SWT1Q5T5J6 900 aaKnown RBP26.84■■□□□ 1.89
DDX41-202ENST00000503078 NLRP14Q86W24 1093 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 CCT8L2Q96SF2 557 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 USP8P40818 1118 aa26.83■■□□□ 1.89
DDX41-202ENST00000503078 FNTAP49354 379 aa26.83■■□□□ 1.89
DDX41-202ENST00000503078 KCNV1Q6PIU1 500 aa26.83■■□□□ 1.89
DDX41-202ENST00000503078 ZNF571Q7Z3V5 609 aaPredicted RBP26.83■■□□□ 1.89
DDX41-202ENST00000503078 MYCBPAPQ8TBZ2 947 aa26.83■■□□□ 1.89
DDX41-202ENST00000503078 BZW2Q9Y6E2 419 aaKnown RBP26.83■■□□□ 1.89
DDX41-202ENST00000503078 THSD7AQ9UPZ6 1657 aa26.83■■□□□ 1.89
DDX41-202ENST00000503078 PPP1R11O60927 126 aaPredicted RBP26.83■■□□□ 1.88
DDX41-202ENST00000503078 HSD17B3P37058 310 aa26.83■■□□□ 1.88
DDX41-202ENST00000503078 MRPL12P52815 198 aaKnown RBP26.83■■□□□ 1.88
DDX41-202ENST00000503078 ADGRF4Q8IZF3 695 aa26.83■■□□□ 1.88
DDX41-202ENST00000503078 ARFGAP2Q8N6H7 521 aa26.83■■□□□ 1.88
DDX41-202ENST00000503078 CD209Q9NNX6 404 aa26.83■■□□□ 1.88
DDX41-202ENST00000503078 MYH7BA7E2Y1 1941 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 CEP104O60308 925 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 CYP11B2P19099 503 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 LRRC57Q8N9N7 239 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 CALR3Q96L12 384 aaKnown RBP26.82■■□□□ 1.88
DDX41-202ENST00000503078 USP21Q9UK80 565 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 HDAC9Q9UKV0 1011 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 ACTN1P12814 892 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 SEC24CP53992 1094 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 DPY19L2P1Q6NXN4 242 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 LRRC45Q96CN5 670 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 FAM163AQ96GL9 167 aaPredicted RBP26.82■■□□□ 1.88
DDX41-202ENST00000503078 SPAG5Q96R06 1193 aa26.82■■□□□ 1.88
DDX41-202ENST00000503078 POTEB3A0JP26 581 aa26.81■■□□□ 1.88
DDX41-202ENST00000503078 POTECB2RU33 542 aa26.81■■□□□ 1.88
DDX41-202ENST00000503078 GCOM1H8Y6P7 765 aaPredicted RBP26.81■■□□□ 1.88
DDX41-202ENST00000503078 FAM107AO95990 144 aa26.81■■□□□ 1.88
DDX41-202ENST00000503078 MYZAPP0CAP1 466 aa26.81■■□□□ 1.88
DDX41-202ENST00000503078 NR2F2P24468 414 aa26.81■■□□□ 1.88
DDX41-202ENST00000503078 POTEBQ6S5H4 581 aa26.81■■□□□ 1.88
DDX41-202ENST00000503078 FRMD3A2A2Y4 597 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 BHMG1C9JSJ3 638 aaPredicted RBP26.8■■□□□ 1.88
DDX41-202ENST00000503078 GNPATO15228 680 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 EIF6P56537 245 aaKnown RBP26.8■■□□□ 1.88
DDX41-202ENST00000503078 ZNF543Q08ER8 600 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 NAP1L4Q99733 375 aaKnown RBP26.8■■□□□ 1.88
DDX41-202ENST00000503078 GGA2Q9UJY4 613 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 NAGPAQ9UK23 515 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 H0YGN5 161 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 UCHL3P15374 230 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 SLC9A1P19634 815 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 SLF2Q8IX21 1173 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 GOLPH3Q9H4A6 298 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 NFS1Q9Y697 457 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 KIF13BQ9NQT8 1826 aa26.8■■□□□ 1.88
DDX41-202ENST00000503078 IGKV6D-41A0A0C4DH26 115 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 PGRMC1O00264 195 aaKnown RBP26.79■■□□□ 1.88
DDX41-202ENST00000503078 SLC26A4O43511 780 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 KRT18P05783 430 aaKnown RBP26.79■■□□□ 1.88
DDX41-202ENST00000503078 HPDP32754 393 aaPredicted RBP26.79■■□□□ 1.88
DDX41-202ENST00000503078 HDLBPQ00341 1268 aaKnown RBP26.79■■□□□ 1.88
DDX41-202ENST00000503078 UAP1Q16222 522 aaPredicted RBP26.79■■□□□ 1.88
DDX41-202ENST00000503078 FRMD5Q7Z6J6 570 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 PITPNM2Q9BZ72 1349 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 H0YHG0 523 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 AKR1B1P15121 316 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 ALKBH5Q6P6C2 394 aaKnown RBP26.79■■□□□ 1.88
DDX41-202ENST00000503078 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.79■■□□□ 1.884e-9■■□□□ 12.5
DDX41-202ENST00000503078 CENPHQ9H3R5 247 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 PSTPIP2Q9H939 334 aa26.79■■□□□ 1.88
DDX41-202ENST00000503078 GAKO14976 1311 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 E7EVH7 732 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 SART1O43290 800 aaKnown RBP26.78■■□□□ 1.88
DDX41-202ENST00000503078 ZBTB48P10074 688 aaPredicted RBP26.78■■□□□ 1.88
DDX41-202ENST00000503078 AP1M1Q9BXS5 423 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 ZHX3Q9H4I2 956 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 ARMCX3Q9UH62 379 aaPredicted RBP26.78■■□□□ 1.88
DDX41-202ENST00000503078 SWAP70Q9UH65 585 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 NOC2LQ9Y3T9 749 aaKnown RBP26.78■■□□□ 1.88
DDX41-202ENST00000503078 ARFGEF1Q9Y6D6 1849 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 AFPP02771 609 aaKnown RBP26.78■■□□□ 1.88
DDX41-202ENST00000503078 IL1R1P14778 569 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 GPSM2P81274 684 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 ARSHQ5FYA8 562 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 FAM182BQ5T319 152 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 DPP8Q6V1X1 898 aaPredicted RBP26.78■■□□□ 1.88
DDX41-202ENST00000503078 DDX42Q86XP3 938 aaKnown RBP eCLIP26.78■■□□□ 1.88
DDX41-202ENST00000503078 CLEC10AQ8IUN9 316 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 METTL13Q8N6R0 699 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 TPCN2Q8NHX9 752 aa26.78■■□□□ 1.88
DDX41-202ENST00000503078 CCDC188H7C350 402 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 CTNNA1P35221 906 aaKnown RBP26.77■■□□□ 1.88
DDX41-202ENST00000503078 PRKCIP41743 596 aa26.77■■□□□ 1.88
DDX41-202ENST00000503078 MNAT1P51948 309 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms