RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 PCBP2Q15366 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
RFC1-204ENST00000502706 C11orf74Q86VG3 221 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 SLFN12Q8IYM2 578 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 ZNF513Q8N8E2 541 aaPredicted RBP7.33□□□□□ -1.24
RFC1-204ENST00000502706 SMC1BQ8NDV3 1235 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 ACRBPQ8NEB7 543 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 ACSF2Q96CM8 615 aaPredicted RBP7.33□□□□□ -1.24
RFC1-204ENST00000502706 FAXDC2Q96IV6 333 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 CORO1BQ9BR76 489 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 SOX17Q9H6I2 414 aaPredicted RBP7.33□□□□□ -1.24
RFC1-204ENST00000502706 C1orf112Q9NSG2 853 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 SAMD15Q9P1V8 674 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
RFC1-204ENST00000502706 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 DMTF1Q9Y222 760 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 AKT3Q9Y243 479 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 ZKSCAN5Q9Y2L8 839 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 MORC2Q9Y6X9 1032 aaPredicted RBP7.33□□□□□ -1.24
RFC1-204ENST00000502706 FGD6Q6ZV73 1430 aa7.33□□□□□ -1.24
RFC1-204ENST00000502706 RPRD2Q5VT52 1461 aaKnown RBP7.32□□□□□ -1.24
RFC1-204ENST00000502706 COL16A1Q07092 1604 aaPredicted RBP7.32□□□□□ -1.24
RFC1-204ENST00000502706 BLACEA4D250 179 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 ZNF891A8MT65 544 aaPredicted RBP7.32□□□□□ -1.24
RFC1-204ENST00000502706 CBFA2T2O43439 604 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 PIP5K1CO60331 668 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 CLEC3AO75596 197 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 CRTAMO95727 393 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 IL33O95760 270 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 FAM163BP0C2L3 166 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 SETSIPP0DME0 302 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 HSPA6P17066 643 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 TYRP1P17643 537 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 GBP1P32455 592 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 ERVK-21P61565 698 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 KRT85P78386 507 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 OCRLQ01968 901 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 SLC4A8Q2Y0W8 1093 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 PGM2L1Q6PCE3 622 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 SRLQ86TD4 932 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 CCDC144CPQ8IYA2 1237 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 NXPE1Q8N323 547 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 PARD3BQ8TEW8 1205 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 FAM168AQ92567 244 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 TRMT2BQ96GJ1 504 aaKnown RBP7.32□□□□□ -1.24
RFC1-204ENST00000502706 MRGPRX3Q96LB0 322 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 SLC38A3Q99624 504 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 MYD88Q99836 296 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 NMRK2Q9NPI5 230 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 IPPQ9Y573 584 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 PLEKHG1Q9ULL1 1385 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
RFC1-204ENST00000502706 CHD2O14647 1828 aaKnown RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 DCDC2CA8MYV0 355 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 C9IYK1 514 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 PRRT4C9JH25 899 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 FZD9O00144 591 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 CBX4O00257 560 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 AQP7O14520 342 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 TIMM44O43615 452 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 ZFYVE9O95405 1425 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 NAT1P18440 290 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 LSSP48449 732 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 MAP4K2Q12851 820 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 SIM2Q14190 667 aaPredicted RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 KCTD2Q14681 263 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 ZNF574Q6ZN55 896 aaPredicted RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 MMS22LQ6ZRQ5 1243 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 ZNF765Q7L2R6 523 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 WFDC3Q8IUB2 231 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 MCATQ8IVS2 390 aaKnown RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 TRIM59Q8IWR1 403 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 CMTR2Q8IYT2 770 aaKnown RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 C1orf162Q8NEQ5 155 aaPredicted RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 BTN2A2Q8WVV5 523 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 GPR101Q96P66 508 aaPredicted RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 CCDC86Q9H6F5 360 aaKnown RBP7.31□□□□□ -1.24
RFC1-204ENST00000502706 WHRNQ9P202 907 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 MYO5BQ9ULV0 1848 aa7.31□□□□□ -1.24
RFC1-204ENST00000502706 RIMS2Q9UQ26 1411 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 ABHD14A-ACY1A0A1B0GW23 586 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 RBP3P10745 1247 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 DSG1Q02413 1049 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 GALEQ14376 348 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 POU4F3Q15319 338 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 MEX3CQ5U5Q3 659 aaKnown RBP7.3□□□□□ -1.24
RFC1-204ENST00000502706 DCAF15Q66K64 600 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 CATIPQ7Z7H3 387 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 C12orf40Q86WS4 652 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 RCC1LQ96I51 464 aaKnown RBP7.3□□□□□ -1.24
RFC1-204ENST00000502706 CCDC74BQ96LY2 380 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 NEUROD6Q96NK8 337 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 WNT10AQ9GZT5 417 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.3□□□□□ -1.24
RFC1-204ENST00000502706 MKS1Q9NXB0 559 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 C9orf78Q9NZ63 289 aaPredicted RBP7.3□□□□□ -1.24
RFC1-204ENST00000502706 EMC9Q9Y3B6 208 aa7.3□□□□□ -1.24
RFC1-204ENST00000502706 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms