RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 LPAR1Q92633 364 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 RAD54LQ92698 747 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 CCDC42Q96M95 316 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 MED4Q9NPJ6 270 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 BIN2Q9UBW5 565 aaPredicted RBP13.75□□□□□ -0.21
AFF3-215ENST00000498090 IRF6O14896 467 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 LCA5LO95447 670 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 USP14P54578 494 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 PPATQ06203 517 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 HSP90B2PQ58FF3 399 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 SH3D19Q5HYK7 790 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 DNAJC5GQ8N7S2 189 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 KIAA0895Q8NCT3 520 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 PNKPQ96T60 521 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
AFF3-215ENST00000498090 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 JRKLQ9Y4A0 524 aa13.75□□□□□ -0.21
AFF3-215ENST00000498090 C19orf81C9J6K1 198 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 POLR3GO15318 223 aaPredicted RBP13.74□□□□□ -0.21
AFF3-215ENST00000498090 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
AFF3-215ENST00000498090 TACC1O75410 805 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 GNA14O95837 355 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 FCER1AP12319 257 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 SNAP25P60880 206 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 EHHADHQ08426 723 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 PPIL2Q13356 520 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 HYIQ5T013 277 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 CUL5Q93034 780 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 SECISBP2LQ93073 1101 aaKnown RBP13.74□□□□□ -0.21
AFF3-215ENST00000498090 PNMA5Q96PV4 448 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
AFF3-215ENST00000498090 ABCB6Q9NP58 842 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 PRR12Q9ULL5 1215 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 KCNH4Q9UQ05 1017 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 PCNTO95613 3336 aa13.74□□□□□ -0.21
AFF3-215ENST00000498090 A0A0G2JLL6 359 aaPredicted RBP13.73□□□□□ -0.21
AFF3-215ENST00000498090 MYMKA6NI61 221 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 UNCXA6NJT0 531 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 RASSF10A6NK89 507 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 ABL1P00519 1130 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 RHOXF2BP0C7M4 288 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
AFF3-215ENST00000498090 STAT2P52630 851 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
AFF3-215ENST00000498090 IKQ13123 557 aaPredicted RBP13.73□□□□□ -0.21
AFF3-215ENST00000498090 PRRT2Q7Z6L0 340 aaPredicted RBP13.73□□□□□ -0.21
AFF3-215ENST00000498090 C2orf69Q8N8R5 385 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 FAM71BQ8TC56 605 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 SYN2Q92777 582 aaPredicted RBP13.73□□□□□ -0.21
AFF3-215ENST00000498090 RHOXF2Q9BQY4 288 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 LOC285556D6RIA3 1793 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 PTPRFP10586 1907 aa13.73□□□□□ -0.21
AFF3-215ENST00000498090 SSU72P8A0A1W2PR75 194 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 PLA2G6O60733 806 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 VSNL1P62760 191 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 CASP8Q14790 479 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 CDC37Q16543 378 aaPredicted RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 ZNF572Q7Z3I7 529 aaPredicted RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 ALS2CR12Q96Q35 445 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 SLC39A2Q9NP94 309 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 LUC7LQ9NQ29 371 aaKnown RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 FEM1BQ9UK73 627 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 ATP1A1P05023 1023 aaKnown RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 MOGSQ13724 837 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 MCM6Q14566 821 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 NCAPH2Q6IBW4 605 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 MOXD1Q6UVY6 613 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 FAM160B2Q86V87 743 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 SLC10A4Q96EP9 437 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 WNK4Q96J92 1243 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 TANGO6Q9C0B7 1094 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 TMEM260Q9NX78 707 aa13.72□□□□□ -0.21
AFF3-215ENST00000498090 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
AFF3-215ENST00000498090 CXCL11O14625 94 aa13.71□□□□□ -0.21
AFF3-215ENST00000498090 ZBTB5O15062 677 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms