RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 STAT5BP51692 787 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 ADAM17P78536 824 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 GRIN2CQ14957 1233 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 GRIK4Q16099 956 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 PRR16Q569H4 304 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 TAF2Q6P1X5 1199 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 PLPPR4Q7Z2D5 763 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 RSPH3Q86UC2 560 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 MYLIPQ8WY64 445 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 PCYT2Q99447 389 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 TBC1D22BQ9NU19 505 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
NUP50-219ENST00000497960 YBX2Q9Y2T7 364 aaKnown RBP17.4■□□□□ 0.38
NUP50-219ENST00000497960 RRN3P2A6NIE6 340 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 BACH1O14867 736 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 CTSHP09668 335 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 FOSL2P15408 326 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 XBP1P17861 261 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 USP11P51784 963 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 IKBKEQ14164 716 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 FAM160B1Q5W0V3 765 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 BLIDQ8IZY5 108 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 TUBE1Q9UJT0 475 aa17.39■□□□□ 0.37
NUP50-219ENST00000497960 ATG7O95352 703 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 LARGE1O95461 756 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 CCNE2O96020 404 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 SLC26A2P50443 739 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 WDR5P61964 334 aaKnown RBP17.38■□□□□ 0.37
NUP50-219ENST00000497960 IGBP1P78318 339 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 MIS18BP1Q6P0N0 1132 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 UIMC1Q96RL1 719 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 LIMCH1Q9UPQ0 1083 aa17.38■□□□□ 0.37
NUP50-219ENST00000497960 MBLAC1A4D2B0 266 aaPredicted RBP17.37■□□□□ 0.37
NUP50-219ENST00000497960 DHX15O43143 795 aaKnown RBP17.37■□□□□ 0.37
NUP50-219ENST00000497960 INSRRP14616 1297 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 MYOGP15173 224 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 KRT76Q01546 638 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 PLCB4Q15147 1175 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 PPP2R2DQ66LE6 453 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 ZNF746Q6NUN9 644 aaPredicted RBP17.37■□□□□ 0.37
NUP50-219ENST00000497960 ABHD15Q6UXT9 468 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 DAGLBQ8NCG7 672 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 SLC17A8Q8NDX2 589 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 TBCKQ8TEA7 893 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 WASF1Q92558 559 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 SEPT8Q92599 483 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 GAS2L1Q99501 681 aaPredicted RBP17.37■□□□□ 0.37
NUP50-219ENST00000497960 STK36Q9NRP7 1315 aa17.37■□□□□ 0.37
NUP50-219ENST00000497960 IGKV6D-21A0A0A0MT36 114 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 POTEB3A0JP26 581 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 RPLP2P05387 115 aaKnown RBP17.36■□□□□ 0.37
NUP50-219ENST00000497960 ME3Q16798 604 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 PLEKHG4Q58EX7 1191 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 FAM26DQ5JW98 314 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 POTEBQ6S5H4 581 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 RUFY4Q6ZNE9 571 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 SMAP1Q8IYB5 467 aaPredicted RBP17.36■□□□□ 0.37
NUP50-219ENST00000497960 DBF4BQ8NFT6 615 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 MAFAQ8NHW3 353 aaPredicted RBP17.36■□□□□ 0.37
NUP50-219ENST00000497960 ZBED2Q9BTP6 218 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 ZNF302Q9NR11 478 aa17.36■□□□□ 0.37
NUP50-219ENST00000497960 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
NUP50-219ENST00000497960 TLL1O43897 1013 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
NUP50-219ENST00000497960 PSAPP07602 524 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 MCM2P49736 904 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 NONOQ15233 471 aaKnown RBP eCLIP17.35■□□□□ 0.37
NUP50-219ENST00000497960 TCTN1Q2MV58 587 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 MARCH8Q5T0T0 291 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 SWSAP1Q6NVH7 229 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 PDXDC2PQ6P474 469 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 KRT25Q7Z3Z0 450 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 NECAB1Q8N987 351 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 DNAJB3Q8WWF6 145 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 LENG9Q96B70 501 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 ZSCAN31Q96LW9 406 aaPredicted RBP17.35■□□□□ 0.37
NUP50-219ENST00000497960 PRDM12Q9H4Q4 367 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
NUP50-219ENST00000497960 KCNJ14Q9UNX9 436 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 PCDHA10Q9Y5I2 948 aa17.35■□□□□ 0.37
NUP50-219ENST00000497960 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 M0R2N6 131 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 MSH4O15457 936 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 HBP1O60381 514 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 GAS7O60861 476 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 CHRNA1P02708 482 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 AMHP03971 560 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 CA3P07451 260 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 DEFB103AP81534 67 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 CCDC60Q8IWA6 550 aaPredicted RBP17.34■□□□□ 0.37
NUP50-219ENST00000497960 CKAP2LQ8IYA6 745 aa17.34■□□□□ 0.37
NUP50-219ENST00000497960 ATP8B4Q8TF62 1192 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms