RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 NELFCDQ8IXH7 590 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 BANK1Q8NDB2 785 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 NEK9Q8TD19 979 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 CLMNQ96JQ2 1002 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 TSG101Q99816 390 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
ATG4B-225ENST00000494465 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 HOXD13P35453 343 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 IREB2P48200 963 aaKnown RBP18.32■□□□□ 0.52
ATG4B-225ENST00000494465 XRRA1Q6P2D8 792 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 MOB2Q70IA6 237 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 MIER3Q7Z3K6 550 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 ZC3H15Q8WU90 426 aaKnown RBP18.32■□□□□ 0.52
ATG4B-225ENST00000494465 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
ATG4B-225ENST00000494465 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 POLD4Q9HCU8 107 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 RASSF10A6NK89 507 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 IRF6O14896 467 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 FGFR1OPO95684 399 aaKnown RBP18.31■□□□□ 0.52
ATG4B-225ENST00000494465 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
ATG4B-225ENST00000494465 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
ATG4B-225ENST00000494465 CCDC51Q96ER9 411 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 ELP3Q9H9T3 547 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 TBC1D22BQ9NU19 505 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 MYH11P35749 1972 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 SCN4AP35499 1836 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 PES1O00541 588 aaKnown RBP18.31■□□□□ 0.52
ATG4B-225ENST00000494465 NR3C2P08235 984 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 PTPN14Q15678 1187 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
ATG4B-225ENST00000494465 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-225ENST00000494465 PPATQ06203 517 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 TBC1D8BQ0IIM8 1120 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 PLS1Q14651 629 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 LBX2Q6XYB7 198 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 TOGARAM2Q6ZUX3 1019 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-225ENST00000494465 REXO1L1PQ8IX06 675 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 ERGIC2Q96RQ1 377 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 TTYH3Q9C0H2 523 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 OLFML3Q9NRN5 406 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 ABHD10Q9NUJ1 306 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 COL4A3BPQ9Y5P4 624 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 TTC26A0AVF1 554 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 SOWAHDA6NJG2 315 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 PEX10O60683 326 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 KIF20AO95235 890 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 P4HBP07237 508 aaKnown RBP18.3■□□□□ 0.52
ATG4B-225ENST00000494465 MYBP10242 640 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 CCND2P30279 289 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 MTF1Q14872 753 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 BMT2Q1RMZ1 405 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 VWA3BQ502W6 1294 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-225ENST00000494465 NAA15Q9BXJ9 866 aaKnown RBP18.3■□□□□ 0.52
ATG4B-225ENST00000494465 MAF1Q9H063 256 aa18.3■□□□□ 0.52
ATG4B-225ENST00000494465 DOCK5Q9H7D0 1870 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-225ENST00000494465 SFI1A8K8P3 1242 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 TRAF5O00463 557 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
ATG4B-225ENST00000494465 RGS20O76081 388 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 TPM2P07951 284 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 KLK7P49862 253 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 SYCP1Q15431 976 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 MAN2A1Q16706 1144 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 RAD9BQ6WBX8 426 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 ERO1BQ86YB8 467 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 ANKRD13AQ8IZ07 590 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 NSUN6Q8TEA1 469 aaKnown RBP18.29■□□□□ 0.52
ATG4B-225ENST00000494465 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 CEP63Q96MT8 703 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 KCND2Q9NZV8 630 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 BTBD7Q9P203 1132 aa18.29■□□□□ 0.52
ATG4B-225ENST00000494465 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 CCNE2O96020 404 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 TPM1P09493 284 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 GAP43P17677 238 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 ZNF131P52739 623 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 FIZ1Q96SL8 496 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 NDST4Q9H3R1 872 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 ZSWIM4Q9H7M6 989 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 CAPN11Q9UMQ6 739 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 PPP2R2CQ9Y2T4 447 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 KRT9P35527 623 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 EDRF1Q3B7T1 1238 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 PROCA1Q8NCQ7 364 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-225ENST00000494465 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 TRAF3IP3Q9Y228 551 aa18.28■□□□□ 0.52
ATG4B-225ENST00000494465 CCP110O43303 1012 aa18.27■□□□□ 0.52
ATG4B-225ENST00000494465 PRPF6O94906 941 aaKnown RBP18.27■□□□□ 0.52
ATG4B-225ENST00000494465 LYPLA2O95372 231 aa18.27■□□□□ 0.52
ATG4B-225ENST00000494465 MARSP56192 900 aaKnown RBP18.27■□□□□ 0.52
ATG4B-225ENST00000494465 KNOP1Q1ED39 458 aaKnown RBP18.27■□□□□ 0.52
ATG4B-225ENST00000494465 GADL1Q6ZQY3 521 aa18.27■□□□□ 0.52
ATG4B-225ENST00000494465 MRPL44Q9H9J2 332 aaKnown RBP18.27■□□□□ 0.52
ATG4B-225ENST00000494465 FAM13AO94988 1023 aa18.27■□□□□ 0.52
ATG4B-225ENST00000494465 GUCY2CP25092 1073 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms