RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 RBL2Q08999 1139 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 GRIK4Q16099 956 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 RUFY4Q6ZNE9 571 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 TRMT1LQ7Z2T5 733 aaKnown RBP16.68■□□□□ 0.26
ATG4B-224ENST00000494132 CCDC60Q8IWA6 550 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-224ENST00000494132 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 TRAPPC12Q8WVT3 735 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 PBX4Q9BYU1 374 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 OSBPL7Q9BZF2 842 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-224ENST00000494132 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 TRPC6Q9Y210 931 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 FAM205CA6NFA0 338 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 BACH1O14867 736 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 MSH4O15457 936 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 PFKMP08237 780 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 INSRRP14616 1297 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 STAT5BP51692 787 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 ADAM17P78536 824 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 PLCB4Q15147 1175 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 NONOQ15233 471 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATG4B-224ENST00000494132 MTIF3Q9H2K0 278 aaKnown RBP16.67■□□□□ 0.26
ATG4B-224ENST00000494132 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
ATG4B-224ENST00000494132 CCDC194A0A1B0GVG4 234 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 RSPH10B2B2RC85 870 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 CHMP2AO43633 222 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 ATG7O95352 703 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 RSPH10BP0C881 870 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 GNAT1P11488 350 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 ACTN1P12814 892 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 MYOGP15173 224 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 XBP1P17861 261 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 USP11P51784 963 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 NR5A1Q13285 461 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
ATG4B-224ENST00000494132 SWSAP1Q6NVH7 229 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 ABHD15Q6UXT9 468 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 TMCO2Q7Z6W1 182 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-224ENST00000494132 GUCD1Q96NT3 240 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 ZNF302Q9NR11 478 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 TBC1D22BQ9NU19 505 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 TUBE1Q9UJT0 475 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 LIMCH1Q9UPQ0 1083 aa16.66■□□□□ 0.26
ATG4B-224ENST00000494132 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
ATG4B-224ENST00000494132 LETM2Q2VYF4 491 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 MARCH8Q5T0T0 291 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 GALNT17Q6IS24 598 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 MIS18BP1Q6P0N0 1132 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 WASF1Q92558 559 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 TIFAQ96CG3 184 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 FAM49AQ9H0Q0 323 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-224ENST00000494132 NKX2-4Q9H2Z4 354 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 TCEAL9Q9UHQ7 104 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 YBX2Q9Y2T7 364 aaKnown RBP16.65■□□□□ 0.26
ATG4B-224ENST00000494132 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
ATG4B-224ENST00000494132 IGKV6D-21A0A0A0MT36 114 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 SLC37A4O43826 429 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 CXCL10P02778 98 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
ATG4B-224ENST00000494132 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 FAM160B1Q5W0V3 765 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 PDXDC2PQ6P474 469 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 POTEBQ6S5H4 581 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 PLPPR4Q7Z2D5 763 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 DNAJB3Q8WWF6 145 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 SLC5A5Q92911 643 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 TEKT3Q9BXF9 490 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 UNC45AQ9H3U1 944 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 GABBR1Q9UBS5 961 aa16.64■□□□□ 0.25
ATG4B-224ENST00000494132 GAS7O60861 476 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 ATP4AP20648 1035 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 KRT2P35908 639 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 DEFB103AP81534 67 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 KRT76Q01546 638 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 TMEM62Q0P6H9 643 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 Q4G0T1 1027 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 LRCH2Q5VUJ6 765 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 ZNF746Q6NUN9 644 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-224ENST00000494132 CNKSR3Q6P9H4 555 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 CKAP2LQ8IYA6 745 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-224ENST00000494132 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
ATG4B-224ENST00000494132 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
ATG4B-224ENST00000494132 MBLAC1A4D2B0 266 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-224ENST00000494132 PSAPP07602 524 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 KCNJ6P48051 423 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
ATG4B-224ENST00000494132 KRT40Q6A162 431 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 FAM117BQ6P1L5 589 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 SMAP1Q8IYB5 467 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-224ENST00000494132 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 CDX2Q99626 313 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms