RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TOB2Q14106 344 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 PFKFB3Q16875 520 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 PLEKHG4Q58EX7 1191 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 TAF2Q6P1X5 1199 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 MYOCDQ8IZQ8 938 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 FBXL16Q8N461 479 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 NCOA5Q9HCD5 579 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 MTCH2Q9Y6C9 303 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 ATG2AQ2TAZ0 1938 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 LOXHD1Q8IVV2 1947 aa15.29■□□□□ 0.04
CTDSP1-212ENST00000494067 KAT6AQ92794 2004 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 FAM86B1E9PN63 330 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 REC8O95072 547 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 CCNE2O96020 404 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 CHRNA1P02708 482 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 FAM86B2P0C5J1 330 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 SCG2P13521 617 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 MGAT3Q09327 533 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 PPFIA1Q13136 1202 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 JAKMIP3Q5VZ66 844 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 MCTP2Q6DN12 878 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 CCDC12Q8WUD4 166 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 AGO4Q9HCK5 861 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 JPH1Q9HDC5 661 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 SLC9A2Q9UBY0 812 aa15.28■□□□□ 0.04
CTDSP1-212ENST00000494067 WDR81Q562E7 1941 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 RRN3P2A6NIE6 340 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 TNFRSF10AO00220 468 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 MEIS1O00470 390 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 PSMA5P28066 241 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 GRB10Q13322 594 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 GRIK4Q16099 956 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 CEP55Q53EZ4 464 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 FAM26DQ5JW98 314 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 RASGRP4Q8TDF6 673 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 TRAPPC12Q8WVT3 735 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 COG5Q9UP83 839 aa15.27■□□□□ 0.04
CTDSP1-212ENST00000494067 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.03
CTDSP1-212ENST00000494067 NFASCO94856 1347 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 MBLAC1A4D2B0 266 aaPredicted RBP15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 M0QZ92 97 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 DTNBO60941 627 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 EVCP57679 992 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 ACTR2P61160 394 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 ERVK-21P61565 698 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 CCT2P78371 535 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 RPAINQ86UA6 219 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 GDPD5Q8WTR4 605 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 YME1L1Q96TA2 773 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 IFIH1Q9BYX4 1025 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 ZMYND12Q9H0C1 365 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 TUBE1Q9UJT0 475 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
CTDSP1-212ENST00000494067 PRRC2BQ5JSZ5 2229 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 ESYT2A0FGR8 921 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 DDX39AO00148 427 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 UPP2O95045 317 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 ATG7O95352 703 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 INSRRP14616 1297 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 IGBP1P78318 339 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 PLCB4Q15147 1175 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 IER5Q5VY09 327 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 DNAJB3Q8WWF6 145 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 HLA-CQ95604 372 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 UPF3BQ9BZI7 483 aaKnown RBP15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 C6orf50Q9HD87 102 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 TCEAL9Q9UHQ7 104 aa15.25■□□□□ 0.03
CTDSP1-212ENST00000494067 IGKV6D-21A0A0A0MT36 114 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 GHRP10912 638 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 GNA11P29992 359 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 SLC26A2P50443 739 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 STAT5BP51692 787 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 HTRA4P83105 476 aaPredicted RBP15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 TFF2Q03403 129 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 LPIN1Q14693 890 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 RUFY3Q7L099 469 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 PLPPR4Q7Z2D5 763 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 CCDC60Q8IWA6 550 aaPredicted RBP15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 FBXO22Q8NEZ5 403 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 TOP1MTQ969P6 601 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 LENG9Q96B70 501 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms