RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 MORC3Q14149 939 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 NEDD9Q14511 834 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 MCM6Q14566 821 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 OLFML2BQ68BL8 750 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 SASS6Q6UVJ0 657 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 METTL7BQ6UX53 244 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 ABHD15Q6UXT9 468 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 SV2BQ7L1I2 683 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 SCFD2Q8WU76 684 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 STAMQ92783 540 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 SMARCE1Q969G3 411 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 APBA2Q99767 749 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 LXNQ9BS40 222 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 TELO2Q9Y4R8 837 aa14.15□□□□□ -0.14
VPS52-220ENST00000493674 MYMKA6NI61 221 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 TNPO2O14787 897 aaKnown RBP14.14□□□□□ -0.15
VPS52-220ENST00000493674 CAVIN2O95810 425 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 PLA2G4BP0C869 781 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 RGS2P41220 211 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 QARSP47897 775 aaKnown RBP14.14□□□□□ -0.15
VPS52-220ENST00000493674 ACTR2P61160 394 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 AMPD3Q01432 767 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 CAP1Q01518 475 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 EHHADHQ08426 723 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 CTTNQ14247 550 aaKnown RBP14.14□□□□□ -0.15
VPS52-220ENST00000493674 KCNB1Q14721 858 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 UGCGQ16739 394 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 C4orf19Q8IY42 314 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 SYT2Q8N9I0 419 aaPredicted RBP14.14□□□□□ -0.15
VPS52-220ENST00000493674 BANK1Q8NDB2 785 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 DNAJC19Q96DA6 116 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 TRIM47Q96LD4 638 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 BLZF1Q9H2G9 400 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 ABHD16BQ9H3Z7 469 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 ANO10Q9NW15 660 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 FLRT1Q9NZU1 646 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 PCDHA10Q9Y5I2 948 aa14.14□□□□□ -0.15
VPS52-220ENST00000493674 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 A0A087WWV3 80 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 FRMD3A2A2Y4 597 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 GPR25O00155 361 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 STBD1O95210 358 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 GGPS1O95749 300 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 TBC1D8O95759 1140 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 SUPT20HL2P0C7V6 817 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 XRCC6P12956 609 aaKnown RBP eCLIP14.13□□□□□ -0.15
VPS52-220ENST00000493674 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
VPS52-220ENST00000493674 CYP11B2P19099 503 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 FCGRTP55899 365 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 TTLL4Q14679 1199 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 DPCR1Q3MIW9 517 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 ANO6Q4KMQ2 910 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 CELF3Q5SZQ8 465 aaKnown RBP14.13□□□□□ -0.15
VPS52-220ENST00000493674 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
VPS52-220ENST00000493674 CYFIP1Q7L576 1253 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 EEPD1Q7L9B9 569 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 EMID1Q96A84 441 aaPredicted RBP14.13□□□□□ -0.15
VPS52-220ENST00000493674 NACC1Q96RE7 527 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 ARHGAP39Q9C0H5 1083 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 LRRC27Q9C0I9 530 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 RBSNQ9H1K0 784 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 PDGFCQ9NRA1 345 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 TCEAL9Q9UHQ7 104 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 DBR1Q9UK59 544 aaKnown RBP14.13□□□□□ -0.15
VPS52-220ENST00000493674 DNM3Q9UQ16 869 aa14.13□□□□□ -0.15
VPS52-220ENST00000493674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
VPS52-220ENST00000493674 PVALEFA0A1B0GWK0 134 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 GSTTP1A0A1W2PQM5 241 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 BIN1O00499 593 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 FKTNO75072 461 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 RHOBTB3O94955 611 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 RPN1P04843 607 aaKnown RBP14.12□□□□□ -0.15
VPS52-220ENST00000493674 PSAPP07602 524 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 PSMC4P43686 418 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 PSMC5P62195 406 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 SP3Q02447 781 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 LY6KQ17RY6 165 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 ARSHQ5FYA8 562 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 CCDC60Q8IWA6 550 aaPredicted RBP14.12□□□□□ -0.15
VPS52-220ENST00000493674 TPH2Q8IWU9 490 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 FAM200AQ8TCP9 573 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 BPIFA3Q9BQP9 254 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 DNAJC25Q9H1X3 360 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 RMND1Q9NWS8 449 aa14.12□□□□□ -0.15
VPS52-220ENST00000493674 MAFBQ9Y5Q3 323 aaPredicted RBP14.12□□□□□ -0.15
VPS52-220ENST00000493674 ZNF862O60290 1169 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 LGR5O75473 907 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 ZNF865P0CJ78 1059 aaPredicted RBP14.11□□□□□ -0.15
VPS52-220ENST00000493674 TXNP10599 105 aaKnown RBP14.11□□□□□ -0.15
VPS52-220ENST00000493674 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
VPS52-220ENST00000493674 ACVR2BQ13705 512 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 CCL14Q16627 93 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 TMEM63BQ5T3F8 832 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 MIS18BP1Q6P0N0 1132 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 UNC13DQ70J99 1090 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 GPBP1Q86WP2 473 aa14.11□□□□□ -0.15
VPS52-220ENST00000493674 AFAP1L1Q8TED9 768 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms