RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 PGBD1Q96JS3 809 aa15.27■□□□□ 0.04
SNED1-212ENST00000493358 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.04
SNED1-212ENST00000493358 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 SCG2P13521 617 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 CDC27P30260 824 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 HSPA4P34932 840 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 SREBF1P36956 1147 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 ERVK-21P61565 698 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 IGBP1P78318 339 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 ADAM17P78536 824 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 FUT2Q10981 343 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 FBXO22Q8NEZ5 403 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 ADAMTS19Q8TE59 1207 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 C6orf50Q9HD87 102 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 COG5Q9UP83 839 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 TELO2Q9Y4R8 837 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 KIAA1671Q9BY89 1806 aa15.26■□□□□ 0.03
SNED1-212ENST00000493358 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 UPP2O95045 317 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 CPA1P15085 419 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 GNA11P29992 359 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 PFKFB3Q16875 520 aaPredicted RBP15.25■□□□□ 0.03
SNED1-212ENST00000493358 FAM26DQ5JW98 314 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 RPAINQ86UA6 219 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 REXO1Q8N1G1 1221 aaKnown RBP15.25■□□□□ 0.03
SNED1-212ENST00000493358 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 BICD2Q8TD16 824 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 SNX14Q9Y5W7 946 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 ATG2AQ2TAZ0 1938 aa15.25■□□□□ 0.03
SNED1-212ENST00000493358 NID2Q14112 1375 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 ESYT2A0FGR8 921 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 BACH1O14867 736 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 GHRP10912 638 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 RPS6KB1P23443 525 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 ADD1P35611 737 aaKnown RBP15.24■□□□□ 0.03
SNED1-212ENST00000493358 SLC26A2P50443 739 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 STAT5BP51692 787 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 ACTR2P61160 394 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 HTRA4P83105 476 aaPredicted RBP15.24■□□□□ 0.03
SNED1-212ENST00000493358 SETQ01105 290 aaPredicted RBP15.24■□□□□ 0.03
SNED1-212ENST00000493358 IER5Q5VY09 327 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 JAKMIP3Q5VZ66 844 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 KRT40Q6A162 431 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 RUFY4Q6ZNE9 571 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 KCNB2Q92953 911 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
SNED1-212ENST00000493358 FAM49AQ9H0Q0 323 aaPredicted RBP15.24■□□□□ 0.03
SNED1-212ENST00000493358 AGO4Q9HCK5 861 aaKnown RBP15.24■□□□□ 0.03
SNED1-212ENST00000493358 TMEM260Q9NX78 707 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 MYO7AQ13402 2215 aa15.24■□□□□ 0.03
SNED1-212ENST00000493358 MBLAC1A4D2B0 266 aaPredicted RBP15.23■□□□□ 0.03
SNED1-212ENST00000493358 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
SNED1-212ENST00000493358 CHRNA1P02708 482 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 ARP10275 920 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 INSRRP14616 1297 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 CLK2P49760 499 aaKnown RBP15.23■□□□□ 0.03
SNED1-212ENST00000493358 MRPS6P82932 125 aaKnown RBP15.23■□□□□ 0.03
SNED1-212ENST00000493358 PTPROQ16827 1216 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 PLPPR4Q7Z2D5 763 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 SPRED2Q7Z698 418 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 CYP2W1Q8TAV3 490 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 HLA-CQ95604 372 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 TOP1MTQ969P6 601 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 SUGCTQ9HAC7 445 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 FAM217BQ9NTX9 383 aaPredicted RBP15.23■□□□□ 0.03
SNED1-212ENST00000493358 CDY2AQ9Y6F7 541 aa15.23■□□□□ 0.03
SNED1-212ENST00000493358 POTEB3A0JP26 581 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 MEIS1O00470 390 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 PRPF3O43395 683 aaKnown RBP15.22■□□□□ 0.03
SNED1-212ENST00000493358 LPXNO60711 386 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 TFF2Q03403 129 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
SNED1-212ENST00000493358 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 POTEBQ6S5H4 581 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 TRIM22Q8IYM9 498 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
SNED1-212ENST00000493358 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
SNED1-212ENST00000493358 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 BDP1A6H8Y1 2624 aa15.22■□□□□ 0.03
SNED1-212ENST00000493358 FNDC1Q4ZHG4 1894 aaPredicted RBP15.21■□□□□ 0.03
SNED1-212ENST00000493358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.21■□□□□ 0.03
SNED1-212ENST00000493358 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
SNED1-212ENST00000493358 EPB41L2O43491 1005 aaKnown RBP15.21■□□□□ 0.03
SNED1-212ENST00000493358 MGAT3Q09327 533 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.03
SNED1-212ENST00000493358 LPIN1Q14693 890 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 FBXO47Q5MNV8 452 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 MIS18BP1Q6P0N0 1132 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 CKAP2LQ8IYA6 745 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 FBXL16Q8N461 479 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 FIBCD1Q8N539 461 aa15.21■□□□□ 0.03
SNED1-212ENST00000493358 PHKBQ93100 1093 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms