RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 DHX15O43143 795 aaKnown RBP13.08□□□□□ -0.32
LRTM1-202ENST00000493075 EIF5BO60841 1220 aaKnown RBP13.08□□□□□ -0.32
LRTM1-202ENST00000493075 FAM86B2P0C5J1 330 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 INSRRP14616 1297 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 CIITAP33076 1130 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 STAT5BP51692 787 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
LRTM1-202ENST00000493075 DEFB103AP81534 67 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 MARCH8Q5T0T0 291 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 PLA2G4DQ86XP0 818 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 TRIM22Q8IYM9 498 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 NCOA5Q9HCD5 579 aaKnown RBP13.08□□□□□ -0.32
LRTM1-202ENST00000493075 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 IPO5O00410 1097 aaKnown RBP13.07□□□□□ -0.32
LRTM1-202ENST00000493075 DEXIO95424 95 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 CHRNA1P02708 482 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 AMHP03971 560 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 IGFBP4P22692 258 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 MARK3P27448 753 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 USP11P51784 963 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 ANAPC15P60006 121 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
LRTM1-202ENST00000493075 SSRP1Q08945 709 aaKnown RBP13.07□□□□□ -0.32
LRTM1-202ENST00000493075 PLCB4Q15147 1175 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
LRTM1-202ENST00000493075 ABHD15Q6UXT9 468 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 TUBE1Q9UJT0 475 aa13.07□□□□□ -0.32
LRTM1-202ENST00000493075 CPLX1O14810 134 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 CCNE2O96020 404 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 CTSHP09668 335 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 MGAT3Q09327 533 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
LRTM1-202ENST00000493075 RUFY4Q6ZNE9 571 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
LRTM1-202ENST00000493075 NME8Q8N427 588 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 ZNF577Q9BSK1 485 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
LRTM1-202ENST00000493075 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 PCDHA2Q9Y5H9 948 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 SQORQ9Y6N5 450 aa13.06□□□□□ -0.32
LRTM1-202ENST00000493075 MYH7BA7E2Y1 1941 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 HBP1O60381 514 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 NLRP5P59047 1200 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 HTRA4P83105 476 aaPredicted RBP13.05□□□□□ -0.32
LRTM1-202ENST00000493075 IER5Q5VY09 327 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 FAM160B1Q5W0V3 765 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 ZNF746Q6NUN9 644 aaPredicted RBP13.05□□□□□ -0.32
LRTM1-202ENST00000493075 MIS18BP1Q6P0N0 1132 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 SMAP1Q8IYB5 467 aaPredicted RBP13.05□□□□□ -0.32
LRTM1-202ENST00000493075 DNAJB3Q8WWF6 145 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 TOP1MTQ969P6 601 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 IFIH1Q9BYX4 1025 aaKnown RBP13.05□□□□□ -0.32
LRTM1-202ENST00000493075 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 PCDHA4Q9UN74 947 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
LRTM1-202ENST00000493075 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 SMIM35A0A1B0GVV1 85 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 EDIL3O43854 480 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 PPFIA3O75145 1194 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 ERVK-21P61565 698 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 IGBP1P78318 339 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 MRPS6P82932 125 aaKnown RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 KRT76Q01546 638 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 ANKRD1Q15327 319 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 TMCO2Q7Z6W1 182 aaPredicted RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 DAGLBQ8NCG7 672 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 ATP8B4Q8TF62 1192 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 ARNTL2Q8WYA1 636 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 LENG9Q96B70 501 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 TGS1Q96RS0 853 aaKnown RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 ZNF302Q9NR11 478 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 LMCD1Q9NZU5 365 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 MAFBQ9Y5Q3 323 aaPredicted RBP13.04□□□□□ -0.32
LRTM1-202ENST00000493075 MTCH2Q9Y6C9 303 aa13.04□□□□□ -0.32
LRTM1-202ENST00000493075 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 CYP3A7-CYP3A51PA0A087WV96 503 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-202ENST00000493075 LINC01553A4QN01 128 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 M0R2N6 131 aa13.03□□□□□ -0.32
LRTM1-202ENST00000493075 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms