RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 MRPS6P82932 125 aaKnown RBP12.66□□□□□ -0.38
SND1-215ENST00000492772 PKN1Q16512 942 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 BMP8AQ7Z5Y6 402 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 NPAS4Q8IUM7 802 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 DNAJB3Q8WWF6 145 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 SEPT1Q8WYJ6 367 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 GLG1Q92896 1179 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
SND1-215ENST00000492772 MSLNLQ96KJ4 702 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 PRRX2Q99811 253 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 IL25Q9H293 177 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 ALG13Q9NP73 1137 aaKnown RBP12.66□□□□□ -0.38
SND1-215ENST00000492772 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
SND1-215ENST00000492772 PLAGL2Q9UPG8 496 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 TELO2Q9Y4R8 837 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 CDY2AQ9Y6F7 541 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 MRPL42Q9Y6G3 142 aaKnown RBP12.66□□□□□ -0.38
SND1-215ENST00000492772 SQORQ9Y6N5 450 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 TECTAO75443 2155 aa12.66□□□□□ -0.38
SND1-215ENST00000492772 KMT2EQ8IZD2 1858 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 RRN3P2A6NIE6 340 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 M0QZ92 97 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 CSPG5O95196 566 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 CYP21A2P08686 494 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 KCNA2P16389 499 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 MARK3P27448 753 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 KIF5BP33176 963 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 COASYQ13057 564 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 CAMK1Q14012 370 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 IER5Q5VY09 327 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 USP17L6PQ6QN14 398 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 SMRP1Q8NCR6 262 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 NCOA7Q8NI08 942 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 CTCFLQ8NI51 663 aaPredicted RBP12.65□□□□□ -0.38
SND1-215ENST00000492772 LINC01599Q8WXQ3 324 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 SMARCAD1Q9H4L7 1026 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 PLXNA4Q9HCM2 1894 aa12.65□□□□□ -0.38
SND1-215ENST00000492772 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 MEIS2O14770 477 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 DDAH1O94760 285 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 ITGB1P05556 798 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 SMARCA1P28370 1054 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 CD52P31358 61 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 PTPN5P54829 565 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 MTMR1Q13613 665 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
SND1-215ENST00000492772 TRIM67Q6ZTA4 783 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
SND1-215ENST00000492772 CRIPAKQ8N1N5 446 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
SND1-215ENST00000492772 LZTS2Q9BRK4 669 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 TRPV2Q9Y5S1 764 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 LOXHD1Q8IVV2 1947 aa12.64□□□□□ -0.39
SND1-215ENST00000492772 TMEM221A6NGB7 291 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 LOC730098B7Z3J9 87 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 E7EWF7 191 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 M0R296 226 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 ATP9AO75110 1047 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 SCG2P13521 617 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 DNAJB1P25685 340 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 IGBP1P78318 339 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 PAK2Q13177 524 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
SND1-215ENST00000492772 ADGRD2Q7Z7M1 963 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 PRSS33Q8NF86 280 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 SPPL3Q8TCT6 385 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 POF1BQ8WVV4 589 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
SND1-215ENST00000492772 AZI2Q9H6S1 392 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 AGO3Q9H9G7 860 aaKnown RBP12.63□□□□□ -0.39
SND1-215ENST00000492772 CLEC1BQ9P126 229 aa12.63□□□□□ -0.39
SND1-215ENST00000492772 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 SPDYE3A6NKU9 549 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 MAFGO15525 162 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 INSRRP14616 1297 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 ITGB5P18084 799 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 NRIP1P48552 1158 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 GNAQP50148 359 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 ZXDAP98168 799 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 UBE3AQ05086 875 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 PAN2Q504Q3 1202 aaKnown RBP12.62□□□□□ -0.39
SND1-215ENST00000492772 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 PBXIP1Q96AQ6 731 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 JPH1Q9HDC5 661 aaPredicted RBP12.62□□□□□ -0.39
SND1-215ENST00000492772 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
SND1-215ENST00000492772 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 LRFN2Q9ULH4 789 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms