RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PCDH19Q8TAB3 1148 aa5.78□□□□□ -1.48
RTN4-215ENST00000491592 LIN37Q96GY3 246 aaPredicted RBP5.78□□□□□ -1.48
RTN4-215ENST00000491592 SIN3AQ96ST3 1273 aa5.78□□□□□ -1.48
RTN4-215ENST00000491592 JAM3Q9BX67 310 aa5.78□□□□□ -1.48
RTN4-215ENST00000491592 RSPH9Q9H1X1 276 aaPredicted RBP5.78□□□□□ -1.48
RTN4-215ENST00000491592 RXFP1Q9HBX9 757 aa5.78□□□□□ -1.48
RTN4-215ENST00000491592 INTS7Q9NVH2 962 aaKnown RBP5.78□□□□□ -1.48
RTN4-215ENST00000491592 NUDT5Q9UKK9 219 aa5.78□□□□□ -1.48
RTN4-215ENST00000491592 CFAP43Q8NDM7 1665 aa5.78□□□□□ -1.48
RTN4-215ENST00000491592 RPGRIP1LQ68CZ1 1315 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 DGKIO75912 1065 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 MYL1P05976 194 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 SRGAP2CP0DJJ0 459 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 GNAT1P11488 350 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 TMEM62Q0P6H9 643 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 FAM47CQ5HY64 1035 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 TOX2Q96NM4 488 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 KCNJ15Q99712 375 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 CELF4Q9BZC1 486 aaKnown RBP5.77□□□□□ -1.49
RTN4-215ENST00000491592 AP5M1Q9H0R1 490 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.77□□□□□ -1.49
RTN4-215ENST00000491592 COQ6Q9Y2Z9 468 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 SIT1Q9Y3P8 196 aa5.77□□□□□ -1.49
RTN4-215ENST00000491592 WASHC2AQ641Q2 1341 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 UACAQ9BZF9 1416 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 BICDL2A1A5D9 508 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 ZC3H12DA2A288 527 aaKnown RBP5.76□□□□□ -1.49
RTN4-215ENST00000491592 CCDC66A2RUB6 948 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 HRKO00198 91 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 GOLIM4O00461 696 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 NR1I3Q14994 352 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 CHRNA2Q15822 529 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 EMC4Q5J8M3 183 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 ZCCHC8Q6NZY4 707 aaKnown RBP5.76□□□□□ -1.49
RTN4-215ENST00000491592 ABHD17CQ6PCB6 329 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 OTOP3Q7RTS5 596 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 ZNF605Q86T29 641 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 LRRTM3Q86VH5 581 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 CISD2Q8N5K1 135 aaKnown RBP5.76□□□□□ -1.49
RTN4-215ENST00000491592 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 PIP4K2CQ8TBX8 421 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.76□□□□□ -1.49
RTN4-215ENST00000491592 SEC14L1Q92503 715 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 PEX11GQ96HA9 241 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 DIRC2Q96SL1 478 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 PPP1R16BQ96T49 567 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 TARS2Q9BW92 718 aaKnown RBP5.76□□□□□ -1.49
RTN4-215ENST00000491592 EPB41L4BQ9H329 900 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 KLHL14Q9P2G3 628 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 DBR1Q9UK59 544 aaKnown RBP5.76□□□□□ -1.49
RTN4-215ENST00000491592 NCOA2Q15596 1464 aa5.76□□□□□ -1.49
RTN4-215ENST00000491592 B4E1Z4 1266 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 F8W031 263 aaPredicted RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 KRIT1O00522 736 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 ABLIM1O14639 778 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 CKMP06732 381 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 PYGMP11217 842 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 RAP1GAPP47736 663 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 MAPKAPK2P49137 400 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 DNM2P50570 870 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 ST5P78524 1137 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 EXOSC10Q01780 885 aaKnown RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 SPIRE1Q08AE8 756 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 KCTD2Q14681 263 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 MLANAQ16655 118 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 CCDC96Q2M329 555 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 HABP4Q5JVS0 413 aaKnown RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 STEAP3Q658P3 488 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 OLFML2BQ68BL8 750 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 ZC3H14Q6PJT7 736 aaKnown RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 TMC6Q7Z403 805 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 DDX53Q86TM3 631 aaKnown RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 CREBRFQ8IUR6 639 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 ZSCAN18Q8TBC5 510 aaPredicted RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 PANK1Q8TE04 598 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 TSPAN17Q96FV3 270 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 TSPAN18Q96SJ8 248 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 CDC5LQ99459 802 aaKnown RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 ZNF700Q9H0M5 742 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 NSUN3Q9H649 340 aaKnown RBP5.75□□□□□ -1.49
RTN4-215ENST00000491592 CBLCQ9ULV8 474 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 ZNF652Q9Y2D9 606 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 HCFC2Q9Y5Z7 792 aa5.75□□□□□ -1.49
RTN4-215ENST00000491592 RNF123Q5XPI4 1314 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 SMG6Q86US8 1419 aaKnown RBP5.74□□□□□ -1.49
RTN4-215ENST00000491592 CNTLNQ9NXG0 1405 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 GSG1L2A8MUP6 293 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 SGSM2O43147 1006 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 PDE8AO60658 829 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 GLRX3O76003 335 aaKnown RBP5.74□□□□□ -1.49
RTN4-215ENST00000491592 JMJD7P0C870 316 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 KCNA6P17658 529 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 FLT3P36888 993 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 YBX1P67809 324 aaKnown RBP5.74□□□□□ -1.49
RTN4-215ENST00000491592 TMEM177Q53S58 311 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 PIK3R6Q5UE93 754 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 CNNM4Q6P4Q7 775 aa5.74□□□□□ -1.49
RTN4-215ENST00000491592 PRR23BQ6ZRT6 265 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms