RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
LSM2-213ENST00000491421 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 THEGQ9P2T0 379 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 TUBE1Q9UJT0 475 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 TRPC6Q9Y210 931 aa9.42□□□□□ -0.9
LSM2-213ENST00000491421 MBLAC1A4D2B0 266 aaPredicted RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 PPFIA3O75145 1194 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 GNA11P29992 359 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 PDIA3P30101 505 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 IGBP1P78318 339 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 NBR1Q14596 966 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 PKN1Q16512 942 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 FAM26DQ5JW98 314 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 RUFY3Q7L099 469 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 NIPA1Q7RTP0 329 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 SPRED2Q7Z698 418 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 RPAINQ86UA6 219 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 PLA2G4DQ86XP0 818 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 ATXN2LQ8WWM7 1075 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 APBB2Q92870 758 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 PCYT2Q99447 389 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 RNF26Q9BY78 433 aaPredicted RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 IFIH1Q9BYX4 1025 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 ZMYND12Q9H0C1 365 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 NCOA5Q9HCD5 579 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 MTUS1Q9ULD2 1270 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 CYP46A1Q9Y6A2 500 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 MTCH2Q9Y6C9 303 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
LSM2-213ENST00000491421 TRANK1O15050 2925 aa9.41□□□□□ -0.9
LSM2-213ENST00000491421 LINC01553A4QN01 128 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 RRN3P2A6NIE6 340 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 FAM86B1E9PN63 330 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 DDX39AO00148 427 aaKnown RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 BACH1O14867 736 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 CHRNA1P02708 482 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 CYP3A4P08684 503 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 FAM86B2P0C5J1 330 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 GHRP10912 638 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 INSRRP14616 1297 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 IFNAR1P17181 557 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 STAT5BP51692 787 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 EVCP57679 992 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 CCT2P78371 535 aaKnown RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 GRB10Q13322 594 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 TOB2Q14106 344 aaPredicted RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 PLCB4Q15147 1175 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 NTRK3Q16288 839 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 MARCH8Q5T0T0 291 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 CCDC148Q8NFR7 591 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 BICD2Q8TD16 824 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 GDPD5Q8WTR4 605 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 DNAJB3Q8WWF6 145 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 CRYGNQ8WXF5 182 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 TGS1Q96RS0 853 aaKnown RBP9.4□□□□□ -0.9
LSM2-213ENST00000491421 INSL6Q9Y581 213 aa9.4□□□□□ -0.9
LSM2-213ENST00000491421 MYH7BA7E2Y1 1941 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 IGLV3-22A0A075B6J6 115 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 POTEB3A0JP26 581 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 IPO5O00410 1097 aaKnown RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 CPLX1O14810 134 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 ADAMTS3O15072 1205 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 UPP2O95045 317 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 ATG7O95352 703 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 CCNE2O96020 404 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 RPLP2P05387 115 aaKnown RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 SLC26A2P50443 739 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 ERVK-21P61565 698 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 MRPS5P82675 430 aaKnown RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 MRPS6P82932 125 aaKnown RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 HTRA4P83105 476 aaPredicted RBP9.39□□□□□ -0.91
LSM2-213ENST00000491421 MGAT3Q09327 533 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 LPIN1Q14693 890 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 KRT40Q6A162 431 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 MIS18BP1Q6P0N0 1132 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 POTEBQ6S5H4 581 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 TET1Q8NFU7 2136 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 RASGRP4Q8TDF6 673 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 ZBTB10Q96DT7 871 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 ASB2Q96Q27 587 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 UIMC1Q96RL1 719 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 YME1L1Q96TA2 773 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 ZNF577Q9BSK1 485 aa9.39□□□□□ -0.91
LSM2-213ENST00000491421 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms