RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 CUL5Q93034 780 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 IFT74Q96LB3 600 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 NUCKS1Q9H1E3 243 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 ECT2Q9H8V3 914 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CHMP2AO43633 222 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 EPB41P11171 864 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 NAB2Q15742 525 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 NOP53Q9NZM5 478 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 HDAC9Q9UKV0 1011 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 GRID2IPA4D2P6 1211 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SMIM24O75264 130 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SLC16A2P36021 539 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 CYP2J2P51589 502 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 MXRA7P84157 204 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SPRED3Q2MJR0 410 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 TBC1D10BQ4KMP7 808 aaPredicted RBP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.76e-6■■■□□ 15.9
ERCC3-208ENST00000491292 ISCUQ9H1K1 167 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 MEGF6O75095 1541 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 AKAP12Q02952 1782 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 RASSF10A6NK89 507 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 RASGRF2O14827 1237 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 BAG3O95817 575 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 STAT1P42224 750 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 FNTAP49354 379 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 ADCY7P51828 1080 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 GLYCTKQ8IVS8 523 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 IQCDQ96DY2 449 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SAAL1Q96ER3 474 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 PBKQ96KB5 322 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 EYA3Q99504 573 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 GDF3Q9NR23 364 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 FAM114A2Q9NRY5 505 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 FGFR1OP2Q9NVK5 253 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 NKIRAS1Q9NYS0 192 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 ZNF131P52739 623 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 GSCP56915 257 aaPredicted RBP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 COASYQ13057 564 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SLC17A8Q8NDX2 589 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 ARHGEF2Q92974 986 aaKnown RBP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 CUEDC2Q9H467 287 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 PNPLA7Q6ZV29 1317 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 TCP11X1B4DZS4 312 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 IGF2BP3O00425 579 aaKnown RBP eCLIP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 PRLRP16471 622 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 PLCG2P16885 1265 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 FECHP22830 423 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 PMS2P54278 862 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 IFI35P80217 286 aaPredicted RBP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SLC29A2Q14542 456 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 SETDB1Q15047 1291 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 AK8Q96MA6 479 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 GPR101Q96P66 508 aaPredicted RBP10.68□□□□□ -0.7
ERCC3-208ENST00000491292 NEUROG2Q9H2A3 272 aa10.68□□□□□ -0.7
ERCC3-208ENST00000491292 NWD1Q149M9 1564 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 TRAPPC3O43617 180 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SUN1O94901 812 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 MYL1P05976 194 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 LRRC63Q05C16 580 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 TAOK1Q7L7X3 1001 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 ARMC2Q8NEN0 867 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 NUDT12Q9BQG2 462 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 TMEM47Q9BQJ4 181 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 PLCB1Q9NQ66 1216 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 HOMER3Q9NSC5 361 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 KLHL14Q9P2G3 628 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 MCM8Q9UJA3 840 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SEL1L2Q5TEA6 688 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 GUF1Q8N442 669 aaKnown RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 TAB3Q8N5C8 712 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 DDX23Q9BUQ8 820 aaKnown RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 TRIM7Q9C029 511 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 STMN4Q9H169 189 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 ZNF287Q9HBT7 754 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 GCNT4Q9P109 453 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 RGPD8O14715 1765 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 A0A1W2PQJ5 194 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 UBOX5O94941 541 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SHBGP04278 402 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 KCNJ1P48048 391 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 HP1BP3Q5SSJ5 553 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 ZNF746Q6NUN9 644 aaPredicted RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 TRPM8Q7Z2W7 1104 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SYCE1Q8N0S2 351 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 EPS8L3Q8TE67 593 aaKnown RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 CNOT10Q9H9A5 744 aaKnown RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 DDX25Q9UHL0 483 aaKnown RBP10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SIK3Q9Y2K2 1263 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 MST1RQ04912 1400 aa10.67□□□□□ -0.7
ERCC3-208ENST00000491292 SSU72P8A0A1W2PR75 194 aa10.66□□□□□ -0.7
ERCC3-208ENST00000491292 POTEB3A0JP26 581 aa10.66□□□□□ -0.7
ERCC3-208ENST00000491292 POTECB2RU33 542 aa10.66□□□□□ -0.7
ERCC3-208ENST00000491292 PIK3C2AO00443 1686 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms