RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 HIDE1A8MVS5 230 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 KINO60870 393 aaKnown RBP17.66■□□□□ 0.42
UFD1-209ENST00000489406 EIF2AK2P19525 551 aaKnown RBP17.66■□□□□ 0.42
UFD1-209ENST00000489406 RFX1P22670 979 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 LMNB2Q03252 620 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 PPM1JQ5JR12 505 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 THNSL1Q8IYQ7 743 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 CASP10Q92851 521 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 CYP26B1Q9NR63 512 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
UFD1-209ENST00000489406 LGALS2P05162 132 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 STAG3L1P0CL83 205 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 ATP5JP18859 108 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 IBSPP21815 317 aaPredicted RBP17.65■□□□□ 0.42
UFD1-209ENST00000489406 ARHGAP4P98171 946 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 TBC1D8BQ0IIM8 1120 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 ARHGEF16Q5VV41 709 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 TCF25Q9BQ70 676 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 ENTPD7Q9NQZ7 604 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 AAASQ9NRG9 546 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 DBR1Q9UK59 544 aaKnown RBP17.65■□□□□ 0.42
UFD1-209ENST00000489406 DUSP12Q9UNI6 340 aa17.65■□□□□ 0.42
UFD1-209ENST00000489406 TSPY2A6NKD2 308 aa17.64■□□□□ 0.41
UFD1-209ENST00000489406 NR3C2P08235 984 aa17.64■□□□□ 0.41
UFD1-209ENST00000489406 MGAT3Q09327 533 aa17.64■□□□□ 0.41
UFD1-209ENST00000489406 FBXO47Q5MNV8 452 aa17.64■□□□□ 0.41
UFD1-209ENST00000489406 RARS2Q5T160 578 aaKnown RBP17.64■□□□□ 0.41
UFD1-209ENST00000489406 OSBP2Q969R2 916 aa17.64■□□□□ 0.41
UFD1-209ENST00000489406 USTQ9Y2C2 406 aa17.64■□□□□ 0.41
UFD1-209ENST00000489406 KRBA1A5PL33 1030 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 EOMESO95936 686 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
UFD1-209ENST00000489406 SLC3A2P08195 630 aaKnown RBP17.63■□□□□ 0.41
UFD1-209ENST00000489406 CD52P31358 61 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 SP2Q02086 613 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 RUFY4Q6ZNE9 571 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 TSHZ1Q6ZSZ6 1077 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 C1orf210Q8IVY1 113 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 IFNL3Q8IZI9 196 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 C12orf76Q8N812 135 aaPredicted RBP17.63■□□□□ 0.41
UFD1-209ENST00000489406 LMBR1Q8WVP7 490 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 AGO3Q9H9G7 860 aaKnown RBP17.63■□□□□ 0.41
UFD1-209ENST00000489406 MLXIPQ9HAP2 919 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 LRFN2Q9ULH4 789 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 USP18Q9UMW8 372 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 HCFC2Q9Y5Z7 792 aa17.63■□□□□ 0.41
UFD1-209ENST00000489406 GPAA1O43292 621 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 NARSO43776 548 aaKnown RBP17.62■□□□□ 0.41
UFD1-209ENST00000489406 CFHP08603 1231 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 ADAM17P78536 824 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 ATAT1Q5SQI0 421 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 CEP85Q6P2H3 762 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 HCSTQ9UBK5 93 aa17.62■□□□□ 0.41
UFD1-209ENST00000489406 MYCLP12524 364 aaPredicted RBP17.61■□□□□ 0.41
UFD1-209ENST00000489406 SCG2P13521 617 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
UFD1-209ENST00000489406 PPARAQ07869 468 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 KIAA1841Q6NSI8 718 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 COLGALT1Q8NBJ5 622 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 BCAS3Q9H6U6 928 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 TBC1D17Q9HA65 648 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 KCNK12Q9HB15 430 aa17.61■□□□□ 0.41
UFD1-209ENST00000489406 POTEMA6NI47 508 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
UFD1-209ENST00000489406 GNAT2P19087 354 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 KCNV1Q6PIU1 500 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 POTEGQ6S5H5 508 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 MRPS27Q92552 414 aaKnown RBP17.6■□□□□ 0.41
UFD1-209ENST00000489406 SECISBP2LQ93073 1101 aaKnown RBP17.6■□□□□ 0.41
UFD1-209ENST00000489406 ACSF2Q96CM8 615 aaPredicted RBP17.6■□□□□ 0.41
UFD1-209ENST00000489406 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 FTHL17Q9BXU8 183 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 NGRNQ9NPE2 291 aaKnown RBP17.6■□□□□ 0.41
UFD1-209ENST00000489406 PXMP2Q9NR77 195 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 WNT16Q9UBV4 365 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 PUF60Q9UHX1 559 aaKnown RBP17.6■□□□□ 0.41
UFD1-209ENST00000489406 ANGPTL2Q9UKU9 493 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 CA14Q9ULX7 337 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 LZTS1Q9Y250 596 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 CDY2AQ9Y6F7 541 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 CCDC171Q6TFL3 1326 aa17.6■□□□□ 0.41
UFD1-209ENST00000489406 TBKBP1A7MCY6 615 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 TMC7Q7Z402 723 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 RSPH3Q86UC2 560 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 TRIM50Q86XT4 487 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 APPBP2Q92624 585 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 GPKOWQ92917 476 aaPredicted RBP eCLIP17.59■□□□□ 0.413e-7■■□□□ 12.2
UFD1-209ENST00000489406 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 TYW1Q9NV66 732 aaKnown RBP17.59■□□□□ 0.41
UFD1-209ENST00000489406 DLGAP2Q9P1A6 1054 aa17.59■□□□□ 0.41
UFD1-209ENST00000489406 ASPMQ8IZT6 3477 aa17.58■□□□□ 0.41
UFD1-209ENST00000489406 CACNA1IQ9P0X4 2223 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 M0R2C6 588 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 NOP56O00567 594 aaKnown RBP17.58■□□□□ 0.4
UFD1-209ENST00000489406 RANBP6O60518 1105 aaKnown RBP17.58■□□□□ 0.4
UFD1-209ENST00000489406 KCNA4P22459 653 aa17.58■□□□□ 0.4
UFD1-209ENST00000489406 NOVP48745 357 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms