RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 AOC2O75106 756 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
USP11-211ENST00000489111 RHOBTB3O94955 611 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 XRCC6P12956 609 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP11-211ENST00000489111 BMP6P22004 513 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 SLC12A3P55017 1021 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 ACTR2P61160 394 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 PSMC5P62195 406 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 PSMC6P62333 389 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 MYL5Q02045 173 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 TTLL4Q14679 1199 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 CT47A1Q5JQC4 288 aaPredicted RBP11.16□□□□□ -0.62
USP11-211ENST00000489111 ZNF658Q5TYW1 1059 aaPredicted RBP11.16□□□□□ -0.62
USP11-211ENST00000489111 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 CCDC65Q8IXS2 484 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 SYT2Q8N9I0 419 aaPredicted RBP11.16□□□□□ -0.62
USP11-211ENST00000489111 PIGOQ8TEQ8 1089 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 SCFD2Q8WU76 684 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 SOCS4Q8WXH5 440 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 ZIC5Q96T25 663 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 VTA1Q9NP79 307 aa11.16□□□□□ -0.62
USP11-211ENST00000489111 SYNRGQ9UMZ2 1314 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
USP11-211ENST00000489111 IKBKBO14920 756 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 KLRC4O43908 158 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
USP11-211ENST00000489111 LYPLA2O95372 231 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 GGPS1O95749 300 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 SUPT20HL2P0C7V6 817 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 CYP11B2P19099 503 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 SP2Q02086 613 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 MAP2K5Q13163 448 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 IQCB1Q15051 598 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 MORN1Q5T089 497 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 KLHL10Q6JEL2 608 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 METTL7BQ6UX53 244 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 SMYD4Q8IYR2 804 aaPredicted RBP11.15□□□□□ -0.62
USP11-211ENST00000489111 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.62
USP11-211ENST00000489111 MAML3Q96JK9 1138 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 PANK4Q9NVE7 773 aa11.15□□□□□ -0.62
USP11-211ENST00000489111 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.62
USP11-211ENST00000489111 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 SYNGAP1Q96PV0 1343 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 PSMA7O14818 248 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 FARP2O94887 1054 aaPredicted RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 TXNP10599 105 aaKnown RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 ERCC5P28715 1186 aaPredicted RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 YWHABP31946 246 aaKnown RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 RGS2P41220 211 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 PPP1R2P41236 205 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 FCGRTP55899 365 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 RAD51AP2Q09MP3 1159 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 COASYQ13057 564 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 UGCGQ16739 394 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 FAM160B1Q5W0V3 765 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 MAMDC4Q6UXC1 1216 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 DHX40Q8IX18 779 aaKnown RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 C4orf19Q8IY42 314 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 APBA2Q99767 749 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 TINF2Q9BSI4 451 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 RUSC1Q9BVN2 902 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 ZHX3Q9H4I2 956 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 KCND2Q9NZV8 630 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 WRAP73Q9P2S5 460 aaPredicted RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 GABBR1Q9UBS5 961 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 DBR1Q9UK59 544 aaKnown RBP11.14□□□□□ -0.63
USP11-211ENST00000489111 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 GDAQ9Y2T3 454 aa11.14□□□□□ -0.63
USP11-211ENST00000489111 NPHP3-ACAD11A0A0J9YXS1 232 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 FAM13AO94988 1023 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 ARIH2O95376 493 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 GAP43P17677 238 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 PRKCEQ02156 737 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 PAK1Q13153 545 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 PSMD2Q13200 908 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 KIF22Q14807 665 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 TPD52L1Q16890 204 aaPredicted RBP11.13□□□□□ -0.63
USP11-211ENST00000489111 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
USP11-211ENST00000489111 FAM26FQ5R3K3 315 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 CELF3Q5SZQ8 465 aaKnown RBP11.13□□□□□ -0.63
USP11-211ENST00000489111 RINT1Q6NUQ1 792 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 SWSAP1Q6NVH7 229 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 ABHD15Q6UXT9 468 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 OTUD6AQ7L8S5 288 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 DNAJC19Q96DA6 116 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 SPATA33Q96N06 139 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 REEP2Q9BRK0 252 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 AZI2Q9H6S1 392 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 ZNF302Q9NR11 478 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 ANKEF1Q9NU02 776 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 ZHX1Q9UKY1 873 aaPredicted RBP11.13□□□□□ -0.63
USP11-211ENST00000489111 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
USP11-211ENST00000489111 IGSF9BQ9UPX0 1349 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms