RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 EVPLQ92817 2033 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 CTNNB1P35222 781 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 NAPAP54920 295 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 IGBP1P78318 339 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 TYW1BQ6NUM6 668 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 TSHZ1Q6ZSZ6 1077 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 FIBCD1Q8N539 461 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 BANK1Q8NDB2 785 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 IL17RAQ96F46 866 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 PCYT2Q99447 389 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 MXRA8Q9BRK3 442 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 KCNH7Q9NS40 1196 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 CDY2AQ9Y6F7 541 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 WDR81Q562E7 1941 aa21.07■□□□□ 0.96
HDAC6-231ENST00000488905 RPLP2P05387 115 aaKnown RBP21.06■□□□□ 0.96
HDAC6-231ENST00000488905 MRPS6P82932 125 aaKnown RBP21.06■□□□□ 0.96
HDAC6-231ENST00000488905 RTN1Q16799 776 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 BMP2KLQ5H9B9 411 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 TEX2Q8IWB9 1127 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.06■□□□□ 0.96
HDAC6-231ENST00000488905 KHSRPQ92945 711 aaKnown RBP eCLIP21.06■□□□□ 0.96
HDAC6-231ENST00000488905 ZBTB10Q96DT7 871 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 PGBD1Q96JS3 809 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 AZI2Q9H6S1 392 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 RIC8AQ9NPQ8 531 aa21.06■□□□□ 0.96
HDAC6-231ENST00000488905 NFASCO94856 1347 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 RRN3P2A6NIE6 340 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 C5orf67F2Z3F1 127 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 hCG_1984214I3L0E3 225 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 ZBTB43O43298 467 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 LINC00271P0C7V0 271 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 INSRRP14616 1297 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 ADCY7P51828 1080 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 TCEAL5Q5H9L2 206 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 PTCRAQ6ISU1 281 aaPredicted RBP21.05■□□□□ 0.96
HDAC6-231ENST00000488905 ZNF713Q8N859 430 aaPredicted RBP21.05■□□□□ 0.96
HDAC6-231ENST00000488905 CYP2W1Q8TAV3 490 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 NEK9Q8TD19 979 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 TCEANC2Q96MN5 208 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 ANO3Q9BYT9 981 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 FAM49AQ9H0Q0 323 aaPredicted RBP21.05■□□□□ 0.96
HDAC6-231ENST00000488905 NSUN3Q9H649 340 aaKnown RBP21.05■□□□□ 0.96
HDAC6-231ENST00000488905 CD320Q9NPF0 282 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 TRPC6Q9Y210 931 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 RWDD3Q9Y3V2 267 aa21.05■□□□□ 0.96
HDAC6-231ENST00000488905 STXBP3O00186 592 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 FOSP01100 380 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-231ENST00000488905 IL9P15248 144 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 ACTR2P61160 394 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 FUT2Q10981 343 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 CEP55Q53EZ4 464 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 FAM178BQ8IXR5 827 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 LINC01599Q8WXQ3 324 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 C11orf84Q9BUA3 381 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-231ENST00000488905 BRPF3Q9ULD4 1205 aa21.04■□□□□ 0.96
HDAC6-231ENST00000488905 TRIOO75962 3097 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 ENPP3O14638 875 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 RB1P06400 928 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 CD52P31358 61 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 ITGB3BPQ13352 177 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 COL19A1Q14993 1142 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 PLCB4Q15147 1175 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 TNPO1Q92973 898 aaKnown RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 CLP1Q92989 425 aaKnown RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 PABPC5Q96DU9 382 aaKnown RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 LRFN3Q9BTN0 628 aa21.03■□□□□ 0.96
HDAC6-231ENST00000488905 AGO3Q9H9G7 860 aaKnown RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 FNDC1Q4ZHG4 1894 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-231ENST00000488905 GOLGA8AA7E2F4 631 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 GOLGA8BA8MQT2 603 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 H3BQ06 376 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-231ENST00000488905 M0QZ92 97 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 ARP10275 920 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 SREBF1P36956 1147 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 PLA2G5P39877 138 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 AP3B2Q13367 1082 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 PUS10Q3MIT2 529 aaKnown RBP21.02■□□□□ 0.96
HDAC6-231ENST00000488905 TMEM31Q5JXX7 168 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 IER5Q5VY09 327 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 DHX32Q7L7V1 743 aaKnown RBP21.02■□□□□ 0.96
HDAC6-231ENST00000488905 PLPPR4Q7Z2D5 763 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 SKAP1Q86WV1 359 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 TRAPPC12Q8WVT3 735 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 ZNF689Q96CS4 500 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-231ENST00000488905 AGO4Q9HCK5 861 aaKnown RBP21.02■□□□□ 0.96
HDAC6-231ENST00000488905 BARHL2Q9NY43 387 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 TRPV2Q9Y5S1 764 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 SQORQ9Y6N5 450 aa21.02■□□□□ 0.96
HDAC6-231ENST00000488905 PLXNA4Q9HCM2 1894 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 KLF18A0A0U1RQI7 1052 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 GRXCR2A6NFK2 248 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 BMPR1AP36894 532 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 CLK2P49760 499 aaKnown RBP21.01■□□□□ 0.95
HDAC6-231ENST00000488905 STAT5BP51692 787 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 TMEM62Q0P6H9 643 aa21.01■□□□□ 0.95
HDAC6-231ENST00000488905 BTG3Q14201 252 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-231ENST00000488905 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms