RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 PSAPP07602 524 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 PSMC4P43686 418 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 SLC26A2P50443 739 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 PSMC5P62195 406 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 MORC3Q14149 939 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 FOXR2Q6PJQ5 311 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 SV2BQ7L1I2 683 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 FBXO16Q8IX29 292 aaPredicted RBP11.96□□□□□ -0.49
USP11-209ENST00000488848 ATP6V0A1Q93050 837 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 BPIFA3Q9BQP9 254 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 TIPINQ9BVW5 301 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 KIAA1024Q9UPX6 916 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 DNM3Q9UQ16 869 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 PCDHA5Q9Y5H7 936 aa11.96□□□□□ -0.49
USP11-209ENST00000488848 GPR25O00155 361 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 RHOBTB3O94955 611 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 STBD1O95210 358 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 GGPS1O95749 300 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 PLA2G4BP0C869 781 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
USP11-209ENST00000488848 GUCY2CP25092 1073 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 ZNF131P52739 623 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 MAP2K1Q02750 393 aaPredicted RBP11.95□□□□□ -0.5
USP11-209ENST00000488848 TYRO3Q06418 890 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 PNOCQ13519 176 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 ACVR2BQ13705 512 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 LAMC2Q13753 1193 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 CAMK4Q16566 473 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 STX1AQ16623 288 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 MIS18BP1Q6P0N0 1132 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 PPTC7Q8NI37 304 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 PXYLP1Q8TE99 480 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 DNAJC19Q96DA6 116 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 DYDC2Q96IM9 177 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
USP11-209ENST00000488848 GPR20Q99678 358 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 ANO10Q9NW15 660 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 RMND1Q9NWS8 449 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 FLRT1Q9NZU1 646 aa11.95□□□□□ -0.5
USP11-209ENST00000488848 WRAP73Q9P2S5 460 aaPredicted RBP11.95□□□□□ -0.5
USP11-209ENST00000488848 GNEQ9Y223 722 aaKnown RBP11.95□□□□□ -0.5
USP11-209ENST00000488848 GSTTP1A0A1W2PQM5 241 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 MYMKA6NI61 221 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 FOXN1O15353 648 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 GH1P01241 217 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 CYBAP13498 195 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 CYP11B2P19099 503 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 NLRP12P59046 1061 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 KIF22Q14807 665 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 ARHGEF6Q15052 776 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 MAP3K21Q5TCX8 1036 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 UNC13DQ70J99 1090 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 CYFIP1Q7L576 1253 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 PLPPR4Q7Z2D5 763 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 CCDC60Q8IWA6 550 aaPredicted RBP11.94□□□□□ -0.5
USP11-209ENST00000488848 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 RASSF8Q8NHQ8 419 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 SEPT1Q8WYJ6 367 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 ERO1AQ96HE7 468 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 SRRDQ9UH36 339 aa11.94□□□□□ -0.5
USP11-209ENST00000488848 A6NJR5 290 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 E9PMD0 336 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 CHMP2AO43633 222 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 ZNF862O60290 1169 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 TRPA1O75762 1119 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 TXNP10599 105 aaKnown RBP11.93□□□□□ -0.5
USP11-209ENST00000488848 BMP6P22004 513 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 HOXD10P28358 340 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 PPP1R2P41236 205 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 RARRES1P49788 294 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 PSMC6P62333 389 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 CAP1Q01518 475 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 CUL4BQ13620 913 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 ARSHQ5FYA8 562 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 XKR3Q5GH77 459 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 SASS6Q6UVJ0 657 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 C1orf186Q6ZWK4 172 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 MLKLQ8NB16 471 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 PCYT2Q99447 389 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 NIFKQ9BYG3 293 aaKnown RBP11.93□□□□□ -0.5
USP11-209ENST00000488848 ARHGAP39Q9C0H5 1083 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 TSPY26PQ9H489 355 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 OLFML3Q9NRN5 406 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 MAN1B1Q9UKM7 699 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 ODF2LQ9ULJ1 636 aa11.93□□□□□ -0.5
USP11-209ENST00000488848 FKTNO75072 461 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 PPFIA4O75335 1185 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 TBC1D8O95759 1140 aa11.92□□□□□ -0.5
USP11-209ENST00000488848 RPN1P04843 607 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms