RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 HERVK_113P62684 666 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 IRX6P78412 446 aaPredicted RBP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 FAM110CQ1W6H9 321 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CTR9Q6PD62 1173 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CCDC129Q6ZRS4 1044 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 SPICE1Q8N0Z3 855 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 PI4K2BQ8TCG2 481 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 OSBP2Q969R2 916 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CHMP4CQ96CF2 233 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 RNF208Q9H0X6 261 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 PORCNQ9H237 461 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 SOX17Q9H6I2 414 aaPredicted RBP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 EPB41L4AQ9HCS5 686 aaPredicted RBP7.08□□□□□ -1.28
CDHR3-213ENST00000488386 CABP5Q9NP86 173 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 RBPJLQ9UBG7 517 aa7.08□□□□□ -1.28
CDHR3-213ENST00000488386 MINDY4BA8MYZ0 360 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 C19orf81C9J6K1 198 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 F8W735 103 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-213ENST00000488386 GPAA1O43292 621 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 FBXO24O75426 580 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 PRDM1O75626 825 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 ECEL1O95672 775 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 DLGAP3O95886 979 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 VCAM1P19320 739 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 ERCC3P19447 782 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 CDK8P49336 464 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 GSTM4Q03013 218 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 PABPC4Q13310 644 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDHR3-213ENST00000488386 UBE3CQ15386 1083 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 C12orf60Q5U649 245 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 WDR78Q5VTH9 848 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 ACAD11Q709F0 780 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 SIAH1Q8IUQ4 282 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 KBTBD3Q8NAB2 608 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 EXOC6Q8TAG9 804 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 COA7Q96BR5 231 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 STRBPQ96SI9 672 aaKnown RBP7.07□□□□□ -1.28
CDHR3-213ENST00000488386 MRPL18Q9H0U6 180 aaKnown RBP7.07□□□□□ -1.28
CDHR3-213ENST00000488386 RPAP3Q9H6T3 665 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-213ENST00000488386 BTBD7Q9P203 1132 aa7.07□□□□□ -1.28
CDHR3-213ENST00000488386 COL11A1P12107 1806 aaPredicted RBP7.06□□□□□ -1.28
CDHR3-213ENST00000488386 RLFQ13129 1914 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 LOC100289279A0A1B0GTE1 492 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 GSG1L2A8MUP6 293 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 RNF113AO15541 343 aaKnown RBP7.06□□□□□ -1.28
CDHR3-213ENST00000488386 IGSF3O75054 1194 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 MX1P20591 662 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 HOXA7P31268 230 aaPredicted RBP7.06□□□□□ -1.28
CDHR3-213ENST00000488386 GCLCP48506 637 aaPredicted RBP7.06□□□□□ -1.28
CDHR3-213ENST00000488386 PRMT2P55345 433 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 ERVK-24P63145 666 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 UBXN2AP68543 259 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 ICA1Q05084 483 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 CCL14Q16627 93 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 CATSPERGQ6ZRH7 1159 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 CERS3Q8IU89 383 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 GPRC5AQ8NFJ5 357 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 DIS3LQ8TF46 1054 aaKnown RBP7.06□□□□□ -1.28
CDHR3-213ENST00000488386 GIPC2Q8TF65 315 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 U2AF1L4Q8WU68 220 aaKnown RBP7.06□□□□□ -1.28
CDHR3-213ENST00000488386 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 TRIB2Q92519 343 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 APPBP2Q92624 585 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 GPATCH3Q96I76 525 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 MEGF10Q96KG7 1140 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 DEFB118Q96PH6 123 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 FSD1Q9BTV5 496 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 USP26Q9BXU7 913 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 TANGO6Q9C0B7 1094 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 LNPKQ9C0E8 428 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 INCENPQ9NQS7 918 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 ATP8A2Q9NTI2 1148 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 MORF4L1Q9UBU8 362 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 GJD2Q9UKL4 321 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 PARP14Q460N5 1801 aa7.06□□□□□ -1.28
CDHR3-213ENST00000488386 SALL3Q9BXA9 1300 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 PDE4DIPQ5VU43 2346 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 IGHDP01880 384 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 APPP05067 770 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 EEF2P13639 858 aaKnown RBP7.05□□□□□ -1.28
CDHR3-213ENST00000488386 GSTT1P30711 240 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 TDO2P48775 406 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 ARL4DP49703 201 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 USP14P54578 494 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 DAB2P98082 770 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 DUOXA2Q1HG44 320 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 RPS26P11Q5JNZ5 115 aaPredicted RBP7.05□□□□□ -1.28
CDHR3-213ENST00000488386 ZSCAN25Q6NSZ9 544 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 TMEM179Q6ZVK1 233 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 C16orf86Q6ZW13 317 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 GPR142Q7Z601 462 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 ATG4CQ96DT6 458 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 C12orf42Q96LP6 360 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms