RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 AMHP03971 560 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 PSMA5P28066 241 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 RCAN1P53805 252 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 ACTR2P61160 394 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 AKAP17AQ02040 695 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 GRB10Q13322 594 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 PKN1Q16512 942 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 RASGRP4Q8TDF6 673 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 TRAPPC12Q8WVT3 735 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 DNAJB3Q8WWF6 145 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 RAD9AQ99638 391 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 SLC26A6Q9BXS9 759 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 FAM49AQ9H0Q0 323 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 AGO4Q9HCK5 861 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 KIAA1671Q9BY89 1806 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 MEIS1O00470 390 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 GHRP10912 638 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 INSRRP14616 1297 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 SREBF1P36956 1147 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 TMEM62Q0P6H9 643 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 AP3B2Q13367 1082 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 PLA2G4DQ86XP0 818 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 IFIH1Q9BYX4 1025 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 C6orf50Q9HD87 102 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 NFASCO94856 1347 aa12.88□□□□□ -0.35
NIPAL3-207ENST00000488155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 CAND2O75155 1236 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 STAT5BP51692 787 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 TFF2Q03403 129 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 PLCB4Q15147 1175 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 REXO1Q8N1G1 1221 aaKnown RBP12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 INSL6Q9Y581 213 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
NIPAL3-207ENST00000488155 BACH1O14867 736 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 LPXNO60711 386 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 CCNE2O96020 404 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 STK3Q13188 491 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 NTRK3Q16288 839 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 FAM26DQ5JW98 314 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 TAF2Q6P1X5 1199 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 CCDC12Q8WUD4 166 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 YME1L1Q96TA2 773 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
NIPAL3-207ENST00000488155 NID2Q14112 1375 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 IGLV3-22A0A075B6J6 115 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 ESYT2A0FGR8 921 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 POTEB3A0JP26 581 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 MBLAC1A4D2B0 266 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 RRN3P2A6NIE6 340 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 DTNBO60941 627 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 IFNAR1P17181 557 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 GNA11P29992 359 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 ERVK-21P61565 698 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 MGAT3Q09327 533 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 LPIN1Q14693 890 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 PRR16Q569H4 304 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 POTEBQ6S5H4 581 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 TOP1MTQ969P6 601 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 ASB2Q96Q27 587 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
NIPAL3-207ENST00000488155 IPO5O00410 1097 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 DHX15O43143 795 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 ATG7O95352 703 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 CYP3A4P08684 503 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms