RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 ODF2LQ9ULJ1 636 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 ZBTB21Q9ULJ3 1066 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 PRR12Q9ULL5 1215 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 MYH1P12882 1939 aa2.91□□□□□ -1.94
C9orf72-205ENST00000488117 QSER1Q2KHR3 1735 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 GOLGA6L10A0A0M3HER8 536 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SHTN1A0MZ66 631 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 TMCO5BA8MYB1 307 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 K7ENM7 598 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 RAD17O75943 681 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SEC31AO94979 1220 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MOCS3O95396 460 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 NR3C1P04150 777 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 POTEJP0CG39 1038 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 FDX1P10109 184 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 BCRP11274 1271 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 LMNB1P20700 586 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MYL7Q01449 175 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CYP4A11Q02928 519 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 EPHA7Q15375 998 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SLC35G1Q2M3R5 365 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CIAPIN1Q6FI81 312 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 BTNL9Q6UXG8 535 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 IFT20Q8IY31 132 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 FAM186BQ8IYM0 893 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SMCR8Q8TEV9 937 aaPredicted RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 HNRNPLLQ8WVV9 542 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 DYDC2Q96IM9 177 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 ACCSQ96QU6 501 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 UIMC1Q96RL1 719 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 NAP1L3Q99457 506 aaPredicted RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CHP1Q99653 195 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MMTAG2Q9BU76 263 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 TIPINQ9BVW5 301 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MED4Q9NPJ6 270 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MAP3K20Q9NYL2 800 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 ZNRF3Q9ULT6 936 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 UBR3Q6ZT12 1888 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 NPHP3-ACAD11A0A0J9YXS1 232 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 GRID2IPA4D2P6 1211 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SPDYE2BA6NHP3 402 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 H0YCG3 227 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 PIK3CDO00329 1044 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 ADAMTS3O15072 1205 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 EXOC3O60645 756 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SPDYE6P0CI01 402 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CYP11B2P19099 503 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 TNFAIP3P21580 790 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 RFX1P22670 979 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CCND2P30279 289 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MATR3P43243 847 aaKnown RBP eCLIP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 JAK3P52333 1124 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 HERVK_113P62684 666 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 RASSF7Q02833 373 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 KCNH2Q12809 1159 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CTTNQ14247 550 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 SPDYE2Q495Y8 402 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 GLE1Q53GS7 698 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 ARHGEF16Q5VV41 709 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 FKBP1CQ5VVH2 108 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 OTUD6AQ7L8S5 288 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CATSPER3Q86XQ3 398 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MSANTD4Q8NCY6 345 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 FAM71BQ8TC56 605 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 HPS3Q969F9 1004 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 MED15Q96RN5 788 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 PSMD1Q99460 953 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 REEP2Q9BRK0 252 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 BHMT2Q9H2M3 363 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 VCPKMTQ9H867 229 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 AGPAT5Q9NUQ2 364 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 TMOD4Q9NZQ9 345 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 LARSQ9P2J5 1176 aaKnown RBP2.9□□□□□ -1.94
C9orf72-205ENST00000488117 CLEC11AQ9Y240 323 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 TMX2Q9Y320 296 aa2.9□□□□□ -1.94
C9orf72-205ENST00000488117 ATRNL1Q5VV63 1379 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 DDX39AO00148 427 aaKnown RBP2.9□□□□□ -1.95
C9orf72-205ENST00000488117 ENC1O14682 589 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 WDR46O15213 610 aaKnown RBP2.9□□□□□ -1.95
C9orf72-205ENST00000488117 MSH4O15457 936 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 PPP1R11O60927 126 aaPredicted RBP2.9□□□□□ -1.95
C9orf72-205ENST00000488117 MED24O75448 989 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 PRPF6O94906 941 aaKnown RBP2.9□□□□□ -1.95
C9orf72-205ENST00000488117 ATP1A1P05023 1023 aaKnown RBP2.9□□□□□ -1.95
C9orf72-205ENST00000488117 IVLP07476 585 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 ALAS1P13196 640 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 CIITAP33076 1130 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 KLK7P49862 253 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 RPS6KA1Q15418 735 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 MIIPQ5JXC2 388 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 ODR4Q5SWX8 454 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 TRAPPC11Q7Z392 1133 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 ZFPM1Q8IX07 1006 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 FAM133AQ8N9E0 248 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 LPAR1Q92633 364 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 HAS1Q92839 578 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 PBKQ96KB5 322 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 TBC1D22BQ9NU19 505 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 GCNT4Q9P109 453 aa2.9□□□□□ -1.95
C9orf72-205ENST00000488117 PIM2Q9P1W9 311 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms