RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FAM107BQ9H098 131 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 LZTFL1Q9NQ48 299 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 PCDHA5Q9Y5H7 936 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 AKR1B15C9JRZ8 316 aaPredicted RBP15.18■□□□□ 0.02
COPS7B-221ENST00000488111 ANKRD65E5RJM6 399 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 PRPF6O94906 941 aaKnown RBP15.18■□□□□ 0.02
COPS7B-221ENST00000488111 RHOXF2BP0C7M4 288 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 ERCC3P19447 782 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 EIF2AK2P19525 551 aaKnown RBP15.18■□□□□ 0.02
COPS7B-221ENST00000488111 TECP42680 631 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 NR1I3Q14994 352 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
COPS7B-221ENST00000488111 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 IL31RAQ8NI17 732 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 ENOX1Q8TC92 643 aaKnown RBP15.18■□□□□ 0.02
COPS7B-221ENST00000488111 AFAP1L1Q8TED9 768 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 MTMR9Q96QG7 549 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 RHOXF2Q9BQY4 288 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 CTAGE9A4FU28 777 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 PP2D1A8MPX8 630 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 MARCH6O60337 910 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 RNF40O75150 1001 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 SYF2O95926 243 aaKnown RBP15.17■□□□□ 0.02
COPS7B-221ENST00000488111 GHRHRQ02643 423 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 TKFCQ3LXA3 575 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CCDC91Q7Z6B0 441 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 ANKRD35Q8N283 1001 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
COPS7B-221ENST00000488111 SYMPKQ92797 1274 aaKnown RBP15.17■□□□□ 0.02
COPS7B-221ENST00000488111 RMDN3Q96TC7 470 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CYP39A1Q9NYL5 469 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 NFE2L3Q9Y4A8 694 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 A0A0U1RQJ8 604 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CTAGE15A4D2H0 777 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 PHACTR2O75167 634 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 SLC10A3P09131 477 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CTAGE8P0CG41 777 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
COPS7B-221ENST00000488111 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
COPS7B-221ENST00000488111 LONRF3Q496Y0 759 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 ZNF569Q5MCW4 686 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CTAGE6Q86UF2 777 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CTAGE4Q8IX94 777 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 ATRIPQ8WXE1 791 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 HAS1Q92839 578 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 SECISBP2LQ93073 1101 aaKnown RBP15.17■□□□□ 0.02
COPS7B-221ENST00000488111 ZIC5Q96T25 663 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 KCNH3Q9ULD8 1083 aa15.17■□□□□ 0.02
COPS7B-221ENST00000488111 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 FAM155AB1AL88 458 aaPredicted RBP15.16■□□□□ 0.02
COPS7B-221ENST00000488111 IGF2BP3O00425 579 aaKnown RBP eCLIP15.16■□□□□ 0.02
COPS7B-221ENST00000488111 LAD1O00515 517 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 CYP3A4P08684 503 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 CYP3A7P24462 503 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 ERVK-24P63145 666 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 LENG9Q96B70 501 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 EHMT1Q9H9B1 1298 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
COPS7B-221ENST00000488111 A0A1B0GTH6 734 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 MYCLP12524 364 aaPredicted RBP15.16■□□□□ 0.02
COPS7B-221ENST00000488111 ORC2Q13416 577 aaPredicted RBP15.16■□□□□ 0.02
COPS7B-221ENST00000488111 HSP90AA4PQ58FG1 418 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 HOMEZQ8IX15 550 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 PORCNQ9H237 461 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 MAN1B1Q9UKM7 699 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 SLC45A1Q9Y2W3 748 aa15.16■□□□□ 0.02
COPS7B-221ENST00000488111 SHOX2O60902 331 aaPredicted RBP15.15■□□□□ 0.02
COPS7B-221ENST00000488111 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
COPS7B-221ENST00000488111 CIITAP33076 1130 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 PRPHP41219 470 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 CNTN2Q02246 1040 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 CYP4F22Q6NT55 531 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 SLC35F6Q8N357 371 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 MLKLQ8NB16 471 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 MBOAT7Q96N66 472 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 NAP1L4Q99733 375 aaKnown RBP15.15■□□□□ 0.02
COPS7B-221ENST00000488111 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 RPTORQ8N122 1335 aa15.15■□□□□ 0.02
COPS7B-221ENST00000488111 IGLV3-22A0A075B6J6 115 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 A0A087X0B3 334 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
COPS7B-221ENST00000488111 MANSC4A6NHS7 340 aaPredicted RBP15.14■□□□□ 0.01
COPS7B-221ENST00000488111 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
COPS7B-221ENST00000488111 FECHP22830 423 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 LONP1P36776 959 aaKnown RBP15.14■□□□□ 0.01
COPS7B-221ENST00000488111 PGM5Q15124 567 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 Q4G0T1 1027 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 NT5DC1Q5TFE4 455 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 SAMD3Q8N6K7 520 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
COPS7B-221ENST00000488111 NAPGQ99747 312 aaPredicted RBP15.14■□□□□ 0.01
COPS7B-221ENST00000488111 PDCD2LQ9BRP1 358 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms