RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 PODNQ7Z5L7 613 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 OSTM1Q86WC4 334 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 CPNE8Q86YQ8 564 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 FAM20CQ8IXL6 584 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 SHISA5Q8N114 240 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 EFHBQ8N7U6 833 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 EVI5LQ96CN4 794 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 MYRFLQ96LU7 910 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 KCNJ15Q99712 375 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 CDIP1Q9H305 208 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 MS4A5Q9H3V2 200 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 ANLNQ9NQW6 1124 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 DDX20Q9UHI6 824 aaKnown RBP4.26□□□□□ -1.73
GPNMB-212ENST00000487890 ADGRL3Q9HAR2 1447 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 IFT172Q9UG01 1749 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 ASXL1Q8IXJ9 1541 aa4.26□□□□□ -1.73
GPNMB-212ENST00000487890 EP400Q96L91 3159 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 AHDC1Q5TGY3 1603 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 NPHP3-ACAD11A0A0J9YXS1 232 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 FAM47E-STBD1D6RA91 191 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 ZNF865P0CJ78 1059 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 ZBTB48P10074 688 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 PAMP19021 973 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 SLC9A1P19634 815 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 LPOP22079 712 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 ADMP35318 185 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 DCCP43146 1447 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 SCAND1P57086 179 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 HTRA3P83110 453 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 LACTBP83111 547 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 LRRC32Q14392 662 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 GRM3Q14832 879 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 BRD3Q15059 726 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 ARHGAP44Q17R89 818 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 MINDY4Q4G0A6 757 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 TMEM240Q5SV17 173 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 EEF1DP3Q658K8 133 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 ZNF787Q6DD87 383 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 IL31Q6EBC2 164 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 PAOXQ6QHF9 649 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 C22orf34Q6ZV56 151 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 BRINP3Q76B58 766 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 PNMA8AQ86V59 439 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 CMTR2Q8IYT2 770 aaKnown RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 SVOPQ8N4V2 548 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 PIWIL2Q8TC59 973 aaKnown RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 DDX17Q92841 729 aaKnown RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 GATA6Q92908 595 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 UTP4Q969X6 686 aaKnown RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 CLIP3Q96DZ5 547 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 IL17RAQ96F46 866 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 MEGF10Q96KG7 1140 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 MPHOSPH9Q99550 1183 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 ARPC5LQ9BPX5 153 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 JAM3Q9BX67 310 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 SETD5Q9C0A6 1442 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 KCNF1Q9H3M0 494 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 TOPORSQ9NS56 1045 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 AP5S1Q9NUS5 200 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 MKS1Q9NXB0 559 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 MKL2Q9ULH7 1088 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 PNMA8BQ9ULN7 279 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 GIT1Q9Y2X7 761 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 NCOA3Q9Y6Q9 1424 aa4.25□□□□□ -1.73
GPNMB-212ENST00000487890 RGPD8O14715 1765 aaPredicted RBP4.25□□□□□ -1.73
GPNMB-212ENST00000487890 NHSL1Q5SYE7 1610 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 WASHC2AQ641Q2 1341 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 RPGRIP1LQ68CZ1 1315 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 MST1RQ04912 1400 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 LCHNA4D1U4 455 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 IGF2BP3O00425 579 aaKnown RBP eCLIP4.24□□□□□ -1.73
GPNMB-212ENST00000487890 DVL2O14641 736 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 KCNK3O14649 394 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 GSTA4O15217 222 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 FGF10O15520 208 aaPredicted RBP4.24□□□□□ -1.73
GPNMB-212ENST00000487890 KRT37O76014 449 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 AMY2AP04746 511 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 TRIM27P14373 513 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 PDE6AP16499 860 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 AMY2BP19961 511 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 GRK2P25098 689 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 TPP2P29144 1249 aaPredicted RBP4.24□□□□□ -1.73
GPNMB-212ENST00000487890 CYP2C19P33261 490 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 GRK3P35626 688 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 BCL6P41182 706 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 GPR3P46089 330 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 NEK3P51956 506 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 JAM2P57087 298 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 PURAQ00577 322 aaKnown RBP4.24□□□□□ -1.73
GPNMB-212ENST00000487890 LSAMPQ13449 338 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 SAFB2Q14151 953 aaKnown RBP eCLIP4.24□□□□□ -1.73
GPNMB-212ENST00000487890 GALEQ14376 348 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 TERF2Q15554 542 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 VPS72Q15906 364 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 CRY1Q16526 586 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 C10orf62Q5T681 223 aaPredicted RBP4.24□□□□□ -1.73
GPNMB-212ENST00000487890 CDKAL1Q5VV42 579 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 FSTL4Q6MZW2 842 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 OGFOD3Q6PK18 319 aa4.24□□□□□ -1.73
GPNMB-212ENST00000487890 ZPBP2Q6X784 338 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms