RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 C17orf99Q6UX52 265 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 ARMCX2Q7L311 632 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
ZNF541-204ENST00000487275 DHX40Q8IX18 779 aaKnown RBP8.95□□□□□ -0.98
ZNF541-204ENST00000487275 FBXO16Q8IX29 292 aaPredicted RBP8.95□□□□□ -0.98
ZNF541-204ENST00000487275 CCDC65Q8IXS2 484 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
ZNF541-204ENST00000487275 MORC4Q8TE76 937 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 PIGOQ8TEQ8 1089 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 CAPNS2Q96L46 248 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 BHMT2Q9H2M3 363 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 DIS3Q9Y2L1 958 aaKnown RBP8.95□□□□□ -0.98
ZNF541-204ENST00000487275 PCDHA10Q9Y5I2 948 aa8.95□□□□□ -0.98
ZNF541-204ENST00000487275 RASSF10A6NK89 507 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 BACH1O14867 736 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 IKBKBO14920 756 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 ECM2O94769 699 aaPredicted RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 LYPLA2O95372 231 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 UBA1P22314 1058 aaKnown RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 ERCC5P28715 1186 aaPredicted RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 PPP1R2P41236 205 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 ACTR2P61160 394 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 MYL5Q02045 173 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 SP2Q02086 613 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 TTLL4Q14679 1199 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 KLHL10Q6JEL2 608 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 CYFIP1Q7L576 1253 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 C4orf19Q8IY42 314 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 ATP6V0A1Q93050 837 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 CCDC43Q96MW1 224 aaKnown RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 ZIC5Q96T25 663 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 ZHX3Q9H4I2 956 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 MLXIPQ9HAP2 919 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 VTA1Q9NP79 307 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 PANK4Q9NVE7 773 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 GABBR1Q9UBS5 961 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 DDX41Q9UJV9 622 aaKnown RBP8.94□□□□□ -0.98
ZNF541-204ENST00000487275 CTNND2Q9UQB3 1225 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 GDAQ9Y2T3 454 aa8.94□□□□□ -0.98
ZNF541-204ENST00000487275 NPHP3-ACAD11A0A0J9YXS1 232 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 TNPO2O14787 897 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 AOC2O75106 756 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 TBCAO75347 108 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 GGPS1O95749 300 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 SUPT20HL2P0C7V6 817 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 TXNP10599 105 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 CD44P16070 742 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 YWHABP31946 246 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 RAD51AP2Q09MP3 1159 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 COASYQ13057 564 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 PAK1Q13153 545 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 PSMD2Q13200 908 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 UGCGQ16739 394 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 TPD52L1Q16890 204 aaPredicted RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 LY6KQ17RY6 165 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 MORN1Q5T089 497 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 RINT1Q6NUQ1 792 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 METTL7BQ6UX53 244 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 MAMDC4Q6UXC1 1216 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 ABHD15Q6UXT9 468 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 MSL3Q8N5Y2 521 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 NPLOC4Q8TAT6 608 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 ENOX1Q8TC92 643 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 SCFD2Q8WU76 684 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 SOCS4Q8WXH5 440 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 DNAJC19Q96DA6 116 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 MAML3Q96JK9 1138 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 RUSC1Q9BVN2 902 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 KCND2Q9NZV8 630 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 WRAP73Q9P2S5 460 aaPredicted RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 DBR1Q9UK59 544 aaKnown RBP8.93□□□□□ -0.98
ZNF541-204ENST00000487275 SYNRGQ9UMZ2 1314 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 PLXNB2O15031 1838 aa8.93□□□□□ -0.98
ZNF541-204ENST00000487275 SYNGAP1Q96PV0 1343 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 NOP56O00567 594 aaKnown RBP8.92□□□□□ -0.98
ZNF541-204ENST00000487275 PSMA7O14818 248 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 ZBTB39O15060 712 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 FAM13AO94988 1023 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 ATG7O95352 703 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 ARIH2O95376 493 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 RGS2P41220 211 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 PRCPP42785 496 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 RARRES1P49788 294 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 FCGRTP55899 365 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 STX17P56962 302 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
ZNF541-204ENST00000487275 CCDC173Q0VFZ6 552 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 GIT2Q14161 759 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 NCAPHQ15003 741 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 ARSHQ5FYA8 562 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 HERC4Q5GLZ8 1057 aaPredicted RBP8.92□□□□□ -0.98
ZNF541-204ENST00000487275 FAM26FQ5R3K3 315 aa8.92□□□□□ -0.98
ZNF541-204ENST00000487275 CELF3Q5SZQ8 465 aaKnown RBP8.92□□□□□ -0.98
ZNF541-204ENST00000487275 FAM160B1Q5W0V3 765 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms