RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 FNDC1Q4ZHG4 1894 aaPredicted RBP13.73□□□□□ -0.21
TRIM56-204ENST00000487252 KRBA1A5PL33 1030 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 SOBPA7XYQ1 873 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 HIDE1A8MVS5 230 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
TRIM56-204ENST00000487252 EOMESO95936 686 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 SHC2P98077 582 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 PAN2Q504Q3 1202 aaKnown RBP13.72□□□□□ -0.21
TRIM56-204ENST00000487252 FBXO47Q5MNV8 452 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 SYTL5Q8TDW5 730 aaPredicted RBP13.72□□□□□ -0.21
TRIM56-204ENST00000487252 SPATA33Q96N06 139 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 IL1RAPL2Q9NP60 686 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 NCDNQ9UBB6 729 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 STX8Q9UNK0 236 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 PCDHB12Q9Y5F1 795 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 MRVI1Q9Y6F6 885 aa13.72□□□□□ -0.21
TRIM56-204ENST00000487252 SPTLC1O15269 473 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 GNAT1P11488 350 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 KIAA1841Q6NSI8 718 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 SETD4Q9NVD3 440 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 ANGPTL2Q9UKU9 493 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 HCFC2Q9Y5Z7 792 aa13.71□□□□□ -0.21
TRIM56-204ENST00000487252 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 NMT2O60551 498 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 LGALS2P05162 132 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 ATP5JP18859 108 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 PMLP29590 882 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 GATMP50440 423 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 PLCB3Q01970 1234 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 SP2Q02086 613 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 ZNF528Q3MIS6 628 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 TBC1D5Q92609 795 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 AGO3Q9H9G7 860 aaKnown RBP13.7□□□□□ -0.22
TRIM56-204ENST00000487252 KCNK12Q9HB15 430 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 NGRNQ9NPE2 291 aaKnown RBP13.7□□□□□ -0.22
TRIM56-204ENST00000487252 AAASQ9NRG9 546 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 TMEM260Q9NX78 707 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 MAST4O15021 2626 aa13.7□□□□□ -0.22
TRIM56-204ENST00000487252 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
TRIM56-204ENST00000487252 SLC30A4O14863 429 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 WEE2P0C1S8 567 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 PLPP4Q5VZY2 271 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
TRIM56-204ENST00000487252 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
TRIM56-204ENST00000487252 POTEMA6NI47 508 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
TRIM56-204ENST00000487252 GGPS1O95749 300 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 PROS1P07225 676 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 NR3C2P08235 984 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
TRIM56-204ENST00000487252 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 TAF2Q6P1X5 1199 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 COLGALT1Q8NBJ5 622 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 TBC1D17Q9HA65 648 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 PARD6AQ9NPB6 346 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
TRIM56-204ENST00000487252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRIM56-204ENST00000487252 SQORQ9Y6N5 450 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 KAT6AQ92794 2004 aa13.68□□□□□ -0.22
TRIM56-204ENST00000487252 NBEAQ8NFP9 2946 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 NARSO43776 548 aaKnown RBP13.67□□□□□ -0.22
TRIM56-204ENST00000487252 DCNP07585 359 aaKnown RBP13.67□□□□□ -0.22
TRIM56-204ENST00000487252 TGFB3P10600 412 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 SCG2P13521 617 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 GLULP15104 373 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 TDO2P48775 406 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 ATAT1Q5SQI0 421 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 XRRA1Q6P2D8 792 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 THNSL1Q8IYQ7 743 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 CLASRPQ8N2M8 674 aaKnown RBP13.67□□□□□ -0.22
TRIM56-204ENST00000487252 ZBTB44Q8NCP5 570 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 IGSF9Q9P2J2 1179 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 PCDHGA2Q9Y5H1 932 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
TRIM56-204ENST00000487252 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
TRIM56-204ENST00000487252 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 LILRB5O75023 590 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 GNAT2P19087 354 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms