RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 IL17AQ16552 155 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 KNOP1Q1ED39 458 aaKnown RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 UBE2TQ9NPD8 197 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 AMFRQ9UKV5 643 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ANKRD62A6NC57 917 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ADAMTS3O15072 1205 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ATP1A1P05023 1023 aaKnown RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 PLEKP08567 350 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 CD19P15391 556 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 GAP43P17677 238 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ALKBH5Q6P6C2 394 aaKnown RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 PADI6Q6TGC4 694 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 FAM76AQ8TAV0 307 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 REEP2Q9BRK0 252 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 LXNQ9BS40 222 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 MKRN3Q13064 507 aaKnown RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 CEP55Q53EZ4 464 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ZC2HC1CQ53FD0 456 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 RSBN1LQ6PCB5 846 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 UHMK1Q8TAS1 419 aaKnown RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ST7Q9NRC1 585 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ZNRF3Q9ULT6 936 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 CAPN11Q9UMQ6 739 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 ADAMTSL3P82987 1691 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 GCLMP48507 274 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 VPS41P49754 854 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 PRELPP51888 382 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 SEL1L2Q5TEA6 688 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 KIFAP3Q92845 792 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 ZDHHC15Q96MV8 337 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 RIOX1Q9H6W3 641 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 KBTBD4Q9NVX7 518 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 ZNF185O15231 689 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 ZNF18P17022 549 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 MESDQ14696 234 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 PRPF38AQ8NAV1 312 aaKnown RBP14.44□□□□□ -0.1
HMGN1-216ENST00000486741 CCDC26Q8TAB7 109 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 ZNF668Q96K58 619 aaPredicted RBP14.44□□□□□ -0.1
HMGN1-216ENST00000486741 KMT5AQ9NQR1 393 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 GOLGA6CA6NDK9 693 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 SLC16A4O15374 487 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 GOLGA6DP0CG33 693 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 MYBP10242 640 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 MTMR2Q13614 643 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 GRIPAP1Q4V328 841 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 SNRNP48Q6IEG0 339 aaKnown RBP14.44□□□□□ -0.1
HMGN1-216ENST00000486741 NFRKBQ6P4R8 1299 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 PPP1R16BQ96T49 567 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 GOLGA6AQ9NYA3 693 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 SERPINA10Q9UK55 444 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 RSPH10B2B2RC85 870 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 DKC1O60832 514 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGN1-216ENST00000486741 SERPING1P05155 500 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 RSPH10BP0C881 870 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 HMGCS2P54868 508 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 ERVK-24P63145 666 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 TRPC3Q13507 836 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 TTC19Q6DKK2 380 aaPredicted RBP14.44□□□□□ -0.1
HMGN1-216ENST00000486741 CATSPER3Q86XQ3 398 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 DAGLBQ8NCG7 672 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 LRRN4CLQ8ND94 238 aa14.44□□□□□ -0.1
HMGN1-216ENST00000486741 KDM3BQ7LBC6 1761 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 TFRCP02786 760 aaKnown RBP14.43□□□□□ -0.1
HMGN1-216ENST00000486741 MRRFQ96E11 262 aaKnown RBP14.43□□□□□ -0.1
HMGN1-216ENST00000486741 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 RASAL2Q9UJF2 1139 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 JRKLQ9Y4A0 524 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 MED24O75448 989 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 HOXA10P31260 410 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-216ENST00000486741 KCTD16Q68DU8 428 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 SELENOSQ9BQE4 189 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 MRFAP1Q9Y605 127 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 DUSP10Q9Y6W6 482 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 MYO3BQ8WXR4 1341 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 ESYT2A0FGR8 921 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 ENTPD3O75355 529 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 MARK3P27448 753 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 NBPF9Q3BBW0 867 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 AP1M1Q9BXS5 423 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 INTS13Q9NVM9 706 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 TRPC6Q9Y210 931 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 ATRNO75882 1429 aa14.43□□□□□ -0.1
HMGN1-216ENST00000486741 A0A1W2PQC6 194 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 PALMO75781 387 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 GOLGA5Q8TBA6 731 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 EPB41L5Q9HCM4 733 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 SMARCAL1Q9NZC9 954 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 FEM1BQ9UK73 627 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 MTUS1Q9ULD2 1270 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 TADA3O75528 432 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 KCNK18Q7Z418 384 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 CCDC105Q8IYK2 499 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 DCPSQ96C86 337 aaKnown RBP14.42□□□□□ -0.1
HMGN1-216ENST00000486741 IWS1Q96ST2 819 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 PAIP2Q9BPZ3 127 aaKnown RBP14.42□□□□□ -0.1
HMGN1-216ENST00000486741 A0A0U1RQJ8 604 aa14.42□□□□□ -0.1
HMGN1-216ENST00000486741 CCDC151A5D8V7 595 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms