RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GAP43P17677 238 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 PTPRAP18433 802 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 SPP2Q13103 211 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 RINT1Q6NUQ1 792 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 WDR59Q6PJI9 974 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 TPH2Q8IWU9 490 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 KLRG1Q96E93 195 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 EPN1Q9Y6I3 576 aaPredicted RBP22.51■■□□□ 1.19
HPS3-206ENST00000486530 RLFQ13129 1914 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 SSC5DA1L4H1 1573 aa22.5■■□□□ 1.19
HPS3-206ENST00000486530 URI1O94763 535 aaPredicted RBP22.5■■□□□ 1.19
HPS3-206ENST00000486530 ITGB5P18084 799 aa22.5■■□□□ 1.19
HPS3-206ENST00000486530 SUPT20HL1Q3ZLR7 823 aa22.5■■□□□ 1.19
HPS3-206ENST00000486530 ARHGAP29Q52LW3 1261 aa22.5■■□□□ 1.19
HPS3-206ENST00000486530 PCNX4Q63HM2 1172 aa22.5■■□□□ 1.19
HPS3-206ENST00000486530 ZNF280CQ8ND82 737 aa22.5■■□□□ 1.19
HPS3-206ENST00000486530 CASP5P51878 434 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 CDK17Q00537 523 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 BMT2Q1RMZ1 405 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 SLC30A10Q6XR72 485 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 SYTL5Q8TDW5 730 aaPredicted RBP22.49■■□□□ 1.19
HPS3-206ENST00000486530 NACC1Q96RE7 527 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 OLFML3Q9NRN5 406 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 TRAF3IP3Q9Y228 551 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 KNOP1Q1ED39 458 aaKnown RBP22.49■■□□□ 1.19
HPS3-206ENST00000486530 MUM1L1Q5H9M0 696 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 PIGOQ8TEQ8 1089 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 KCND2Q9NZV8 630 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 UBIAD1Q9Y5Z9 338 aa22.49■■□□□ 1.19
HPS3-206ENST00000486530 MYH11P35749 1972 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 CETN3O15182 167 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 HSP90AA2PQ14568 343 aaPredicted RBP22.48■■□□□ 1.19
HPS3-206ENST00000486530 C1orf186Q6ZWK4 172 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 CCDC170Q8IYT3 715 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 IL31RAQ8NI17 732 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 ZFP91Q96JP5 570 aaPredicted RBP22.48■■□□□ 1.19
HPS3-206ENST00000486530 C12orf42Q96LP6 360 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 KCNH7Q9NS40 1196 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 HOMER2Q9NSB8 354 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 MYO1AQ9UBC5 1043 aa22.48■■□□□ 1.19
HPS3-206ENST00000486530 POLR2AP24928 1970 aaKnown RBP22.48■■□□□ 1.19
HPS3-206ENST00000486530 RSPH10B2B2RC85 870 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 VWA5AO00534 786 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 CALUO43852 315 aaPredicted RBP22.47■■□□□ 1.19
HPS3-206ENST00000486530 RSPH10BP0C881 870 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 CYLC1P35663 651 aaPredicted RBP22.47■■□□□ 1.19
HPS3-206ENST00000486530 ADAM9Q13443 819 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 DLK2Q6UY11 383 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 TRIM59Q8IWR1 403 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 EDEM3Q9BZQ6 932 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 PDCL3Q9H2J4 239 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 FAM184BQ9ULE4 1060 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 PDXKO00764 312 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 USP2O75604 605 aaPredicted RBP22.47■■□□□ 1.19
HPS3-206ENST00000486530 FAM13AO94988 1023 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 MYBP10242 640 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 HNRNPH3P31942 346 aaKnown RBP22.47■■□□□ 1.19
HPS3-206ENST00000486530 RPS6P62753 249 aaKnown RBP22.47■■□□□ 1.19
HPS3-206ENST00000486530 TKFCQ3LXA3 575 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 NOL9Q5SY16 702 aaKnown RBP22.47■■□□□ 1.19
HPS3-206ENST00000486530 LXNQ9BS40 222 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 MMRN2Q9H8L6 949 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 JADE2Q9NQC1 790 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 ZHX2Q9Y6X8 837 aa22.47■■□□□ 1.19
HPS3-206ENST00000486530 A0A0U1RQJ8 604 aa22.46■■□□□ 1.19
HPS3-206ENST00000486530 EIF3DO15371 548 aaKnown RBP eCLIP22.46■■□□□ 1.19
HPS3-206ENST00000486530 NR2F2P24468 414 aa22.46■■□□□ 1.19
HPS3-206ENST00000486530 ATRIPQ8WXE1 791 aa22.46■■□□□ 1.19
HPS3-206ENST00000486530 ATG4CQ96DT6 458 aa22.46■■□□□ 1.19
HPS3-206ENST00000486530 TRERF1Q96PN7 1200 aa22.46■■□□□ 1.19
HPS3-206ENST00000486530 FAM207AQ9NSI2 230 aaPredicted RBP22.46■■□□□ 1.19
HPS3-206ENST00000486530 TYW1Q9NV66 732 aaKnown RBP22.46■■□□□ 1.19
HPS3-206ENST00000486530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.46■■□□□ 1.19
HPS3-206ENST00000486530 C19orf81C9J6K1 198 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 ARHGAP25P42331 645 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 KRT83P78385 493 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 MAP3K9P80192 1104 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 NAA30Q147X3 362 aaPredicted RBP22.45■■□□□ 1.19
HPS3-206ENST00000486530 MIER3Q7Z3K6 550 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 NEK11Q8NG66 645 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.45■■□□□ 1.19
HPS3-206ENST00000486530 DCPSQ96C86 337 aaKnown RBP22.45■■□□□ 1.19
HPS3-206ENST00000486530 IRX2Q9BZI1 471 aaPredicted RBP22.45■■□□□ 1.19
HPS3-206ENST00000486530 AGO4Q9HCK5 861 aaKnown RBP22.45■■□□□ 1.19
HPS3-206ENST00000486530 SEL1LQ9UBV2 794 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 ODF2LQ9ULJ1 636 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 PLAGL2Q9UPG8 496 aa22.45■■□□□ 1.19
HPS3-206ENST00000486530 REXO2Q9Y3B8 237 aaKnown RBP22.45■■□□□ 1.19
HPS3-206ENST00000486530 GRIN3BO60391 1043 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 PRPF6O94906 941 aaKnown RBP22.45■■□□□ 1.18
HPS3-206ENST00000486530 GCNT3O95395 438 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 OAZ1P54368 228 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 MRPS9P82933 396 aaKnown RBP22.45■■□□□ 1.18
HPS3-206ENST00000486530 MTMR1Q13613 665 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 PGM5Q15124 567 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 DPY19L2Q6NUT2 758 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 RNF207Q6ZRF8 634 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 L3MBTL3Q96JM7 780 aaPredicted RBP22.45■■□□□ 1.18
HPS3-206ENST00000486530 NHEJ1Q9H9Q4 299 aaPredicted RBP22.45■■□□□ 1.18
HPS3-206ENST00000486530 PARVGQ9HBI0 331 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms