RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 ZNF571Q7Z3V5 609 aaPredicted RBP24.67■■□□□ 1.54
CLN5-202ENST00000485938 SPATS2Q86XZ4 545 aaKnown RBP24.67■■□□□ 1.54
CLN5-202ENST00000485938 RTCBQ9Y3I0 505 aaKnown RBP24.67■■□□□ 1.54
CLN5-202ENST00000485938 CETN3O15182 167 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 PPP1R37O75864 691 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 ECHS1P30084 290 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 PTGISQ16647 500 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 TTBK2Q6IQ55 1244 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 SLF2Q8IX21 1173 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 LRRC57Q8N9N7 239 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 SCFD2Q8WU76 684 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 PAGR1Q9BTK6 254 aa24.67■■□□□ 1.54
CLN5-202ENST00000485938 ITGB3BPQ13352 177 aaPredicted RBP24.66■■□□□ 1.54
CLN5-202ENST00000485938 ARSHQ5FYA8 562 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 PBKQ96KB5 322 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 PSTPIP2Q9H939 334 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 PLCB1Q9NQ66 1216 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 ATF5Q9Y2D1 282 aaPredicted RBP24.66■■□□□ 1.54
CLN5-202ENST00000485938 NAA35Q5VZE5 725 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 UIMC1Q96RL1 719 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 HDAC9Q9UKV0 1011 aa24.66■■□□□ 1.54
CLN5-202ENST00000485938 TTLL1O95922 423 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 NR2F2P24468 414 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 MDH1P40925 334 aaKnown RBP24.65■■□□□ 1.54
CLN5-202ENST00000485938 CEP85LQ5SZL2 805 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 LRIG3Q6UXM1 1119 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 MAATS1Q7Z4T9 603 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 ACTRT1Q8TDG2 376 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 TMBIM4Q9HC24 238 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 SWAP70Q9UH65 585 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 KIF13BQ9NQT8 1826 aa24.65■■□□□ 1.54
CLN5-202ENST00000485938 BHMG1C9JSJ3 638 aaPredicted RBP24.64■■□□□ 1.54
CLN5-202ENST00000485938 SLC26A4O43511 780 aa24.64■■□□□ 1.54
CLN5-202ENST00000485938 ZBTB48P10074 688 aaPredicted RBP24.64■■□□□ 1.54
CLN5-202ENST00000485938 SLC9A1P19634 815 aa24.64■■□□□ 1.54
CLN5-202ENST00000485938 CUL1Q13616 776 aa24.64■■□□□ 1.54
CLN5-202ENST00000485938 NAP1L4Q99733 375 aaKnown RBP24.64■■□□□ 1.54
CLN5-202ENST00000485938 GOLPH3Q9H4A6 298 aa24.64■■□□□ 1.54
CLN5-202ENST00000485938 BZW2Q9Y6E2 419 aaKnown RBP24.64■■□□□ 1.54
CLN5-202ENST00000485938 ZBTB5O15062 677 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 MEFVO15553 781 aaPredicted RBP24.64■■□□□ 1.53
CLN5-202ENST00000485938 UCHL3P15374 230 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 GUCY2CP25092 1073 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 CASP5P51878 434 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 SLC12A3P55017 1021 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 KCNMB3Q9NPA1 279 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 NAGPAQ9UK23 515 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 PITPNM2Q9BZ72 1349 aa24.64■■□□□ 1.53
CLN5-202ENST00000485938 USP17L10C9JJH3 530 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 SLC16A2P36021 539 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 HLTFQ14527 1009 aaKnown RBP eCLIP24.63■■□□□ 1.53
CLN5-202ENST00000485938 VPS72Q15906 364 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 FBXW10Q5XX13 1052 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 FRMD5Q7Z6J6 570 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 ZNF473Q8WTR7 871 aaKnown RBP24.63■■□□□ 1.53
CLN5-202ENST00000485938 DAGLAQ9Y4D2 1042 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 CEP104O60308 925 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 MED24O75448 989 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 KIAA0754O94854 1291 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 KRT18P05783 430 aaKnown RBP24.63■■□□□ 1.53
CLN5-202ENST00000485938 ATP2B4P23634 1241 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 HSD17B3P37058 310 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 PICALMQ13492 652 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 IFI16Q16666 785 aaKnown RBP24.63■■□□□ 1.53
CLN5-202ENST00000485938 CALR3Q96L12 384 aaKnown RBP24.63■■□□□ 1.53
CLN5-202ENST00000485938 SPAG5Q96R06 1193 aa24.63■■□□□ 1.53
CLN5-202ENST00000485938 DHX36Q9H2U1 1008 aaKnown RBP24.63■■□□□ 1.53
CLN5-202ENST00000485938 H0YGN5 161 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 CNBD1Q8NA66 436 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 ZHX3Q9H4I2 956 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 ARMCX3Q9UH62 379 aaPredicted RBP24.62■■□□□ 1.53
CLN5-202ENST00000485938 GGA1Q9UJY5 639 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 TRAF3IP3Q9Y228 551 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 NFS1Q9Y697 457 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 SRRM3A6NNA2 597 aaPredicted RBP24.62■■□□□ 1.53
CLN5-202ENST00000485938 AFPP02771 609 aaKnown RBP24.62■■□□□ 1.53
CLN5-202ENST00000485938 PON1P27169 355 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 STAT3P40763 770 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 FNTAP49354 379 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 UAP1Q16222 522 aaPredicted RBP24.62■■□□□ 1.53
CLN5-202ENST00000485938 ALKBH5Q6P6C2 394 aaKnown RBP24.62■■□□□ 1.53
CLN5-202ENST00000485938 NLRP14Q86W24 1093 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 CNPY4Q8N129 248 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 OTUD6BQ8N6M0 293 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 RBM46Q8TBY0 533 aaKnown RBP24.62■■□□□ 1.53
CLN5-202ENST00000485938 MYCBPAPQ8TBZ2 947 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 CCT8L2Q96SF2 557 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 NENFQ9UMX5 172 aa24.62■■□□□ 1.53
CLN5-202ENST00000485938 POTEFA5A3E0 1075 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 POTEIP0CG38 1075 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 HNRNPH1P31943 449 aaKnown RBP24.61■■□□□ 1.53
CLN5-202ENST00000485938 PRKCIP41743 596 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 SEC24CP53992 1094 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 GPATCH4Q5T3I0 446 aaKnown RBP24.61■■□□□ 1.53
CLN5-202ENST00000485938 POTEGQ6S5H5 508 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 POTEEQ6S8J3 1075 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 YTHDF3Q7Z739 585 aaKnown RBP24.61■■□□□ 1.53
CLN5-202ENST00000485938 DNAAF5Q86Y56 855 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 TPCN2Q8NHX9 752 aa24.61■■□□□ 1.53
CLN5-202ENST00000485938 TBC1D22AQ8WUA7 517 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms