RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 MFSD6Q6ZSS7 791 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 KRT25Q7Z3Z0 450 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 RPAINQ86UA6 219 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 IRF2BP1Q8IU81 584 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 SMYD4Q8IYR2 804 aaPredicted RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ADSSL1Q8N142 457 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CCDC82Q8N4S0 544 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 MB21D1Q8N884 522 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CPLX3Q8WVH0 158 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 NELFBQ8WX92 580 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CAVIN3Q969G5 261 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 JAKMIP2Q96AA8 810 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 EPSTI1Q96J88 318 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 ORAI2Q96SN7 254 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 NUP88Q99567 741 aaPredicted RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 NUP58Q9BVL2 599 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 NACAP1Q9BZK3 213 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 DEF6Q9H4E7 631 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 KAT14Q9H8E8 782 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 CABP5Q9NP86 173 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 RBM28Q9NW13 759 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GOLGA6AQ9NYA3 693 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 TAB2Q9NYJ8 693 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 NOP53Q9NZM5 478 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 GGA2Q9UJY4 613 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 SPATA31A3Q5VYP0 1347 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 MROH5Q6ZUA9 1318 aa5.22□□□□□ -1.57
SMARCC1-206ENST00000485737 LAMB2P55268 1798 aa5.21□□□□□ -1.57
SMARCC1-206ENST00000485737 TTC26A0AVF1 554 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 SHTN1A0MZ66 631 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ERICH2A1L162 156 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ANKRD18BA2A2Z9 1011 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 M0R082 166 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PDE2AO00408 941 aaPredicted RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 EBAG9O00559 213 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 OPA1O60313 960 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PHACTR2O75167 634 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 IDH1O75874 414 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 MICAL2O94851 1124 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ERLIN2O94905 339 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 FSBPO95073 299 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PDE8BO95263 885 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 LCA5LO95447 670 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 RPN1P04843 607 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 APPP05067 770 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 FGRP09769 529 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PARP1P09874 1014 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CALM1P0DP23 149 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CALM2P0DP24 149 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CALM3P0DP25 149 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 MYBL2P10244 700 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 NFKB1P19838 968 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 COL8A1P27658 744 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CDC25AP30304 524 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 HOXA7P31268 230 aaPredicted RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 LONP1P36776 959 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PPP1R2P41236 205 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 AFMP43652 599 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PHKA1P46020 1223 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 FNTAP49354 379 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 NT5C2P49902 561 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 DNM2P50570 870 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ARSDP51689 593 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 EPHB4P54760 987 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ZBED6P86452 979 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 UBXN1Q04323 297 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 MAP3K12Q12852 859 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PLCB4Q15147 1175 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 GLE1Q53GS7 698 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 COBLL1Q53SF7 1204 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 EARS2Q5JPH6 523 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CCDC122Q5T0U0 273 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 TMEM164Q5U3C3 297 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 RRAGBQ5VZM2 374 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 KCNV1Q6PIU1 500 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 KIF6Q6ZMV9 814 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 TMTC3Q6ZXV5 915 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CCDC91Q7Z6B0 441 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 YTHDF3Q7Z739 585 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CD302Q8IX05 232 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 MICALL1Q8N3F8 863 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 MREGQ8N565 214 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 PRPF38AQ8NAV1 312 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 TRIM58Q8NG06 486 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF417Q8TAU3 575 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 LPIN2Q92539 896 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 KAT2BQ92831 832 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 IFT43Q96FT9 208 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF587Q96SQ5 575 aaPredicted RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CHP1Q99653 195 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 CAPS2Q9BXY5 557 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNHIT6Q9NWK9 470 aaKnown RBP5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 HDAC6Q9UBN7 1215 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 TRIM10Q9UDY6 481 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 LRFN2Q9ULH4 789 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 GUCA1BQ9UMX6 200 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 SNX12Q9UMY4 172 aa5.21□□□□□ -1.58
SMARCC1-206ENST00000485737 USP20Q9Y2K6 914 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms