RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 NUDT3O95989 172 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 HSD3B2P26439 372 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 RBM10P98175 930 aaKnown RBP5.62□□□□□ -1.51
VPS8-223ENST00000485024 FXNQ16595 210 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 TAF7LQ5H9L4 462 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 LAIR1Q6GTX8 287 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 Q8N1Y9 231 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 KATNBL1Q9H079 304 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 CCDC113Q9H0I3 377 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 GPRC5CQ9NQ84 441 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 ADARB2Q9NS39 739 aaKnown RBP5.62□□□□□ -1.51
VPS8-223ENST00000485024 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 X6R8D5 127 aa5.62□□□□□ -1.51
VPS8-223ENST00000485024 BAZ1AQ9NRL2 1556 aaPredicted RBP5.62□□□□□ -1.51
VPS8-223ENST00000485024 SMAD7O15105 426 aaKnown RBP5.61□□□□□ -1.51
VPS8-223ENST00000485024 CR2P20023 1033 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 CASP7P55210 303 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 IFRD2Q12894 506 aaPredicted RBP5.61□□□□□ -1.51
VPS8-223ENST00000485024 SMAD2Q15796 467 aaKnown RBP5.61□□□□□ -1.51
VPS8-223ENST00000485024 RNF151Q2KHN1 245 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 ANKRD13AQ8IZ07 590 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 C19orf47Q8N9M1 422 aaKnown RBP5.61□□□□□ -1.51
VPS8-223ENST00000485024 DEPDC7Q96QD5 511 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 PIF1Q9H611 641 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 PPT2Q9UMR5 302 aa5.61□□□□□ -1.51
VPS8-223ENST00000485024 H0Y858 1186 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 ZNF37AP17032 561 aaPredicted RBP5.6□□□□□ -1.51
VPS8-223ENST00000485024 GRB10Q13322 594 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 DTX3Q8N9I9 347 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 COPS5Q92905 334 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 TM9SF2Q99805 663 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 PLA2G12BQ9BX93 195 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 TLR9Q9NR96 1032 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 PCDHB4Q9Y5E5 795 aa5.6□□□□□ -1.51
VPS8-223ENST00000485024 PPM1GO15355 546 aaPredicted RBP5.59□□□□□ -1.51
VPS8-223ENST00000485024 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
VPS8-223ENST00000485024 HIBADHP31937 336 aaKnown RBP5.59□□□□□ -1.51
VPS8-223ENST00000485024 USP10Q14694 798 aaKnown RBP5.59□□□□□ -1.51
VPS8-223ENST00000485024 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.51
VPS8-223ENST00000485024 RUFY4Q6ZNE9 571 aa5.59□□□□□ -1.51
VPS8-223ENST00000485024 REXO1L1PQ8IX06 675 aa5.59□□□□□ -1.51
VPS8-223ENST00000485024 ARHGEF39Q8N4T4 335 aa5.59□□□□□ -1.51
VPS8-223ENST00000485024 HNRNPLLQ8WVV9 542 aaKnown RBP5.59□□□□□ -1.51
VPS8-223ENST00000485024 FGD4Q96M96 766 aa5.59□□□□□ -1.51
VPS8-223ENST00000485024 TMEM191CA6NGB0 347 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 MATN2O00339 956 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 ENPP3O14638 875 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 HGSO14964 777 aaPredicted RBP5.58□□□□□ -1.52
VPS8-223ENST00000485024 CHGBP05060 677 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 FOXL1Q12952 345 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 DDR2Q16832 855 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 EPHA10Q5JZY3 1008 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 RNF187Q5TA31 235 aaPredicted RBP5.58□□□□□ -1.52
VPS8-223ENST00000485024 EGFLAMQ63HQ2 1017 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 CEP68Q76N32 757 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 BBC3Q96PG8 261 aaPredicted RBP5.58□□□□□ -1.52
VPS8-223ENST00000485024 SLKQ9H2G2 1235 aaPredicted RBP5.58□□□□□ -1.52
VPS8-223ENST00000485024 SNTG2Q9NY99 539 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 MSRB2Q9Y3D2 182 aa5.58□□□□□ -1.52
VPS8-223ENST00000485024 PDPK1O15530 556 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 CDC14BO60729 498 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 TADA3O75528 432 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 LMNAP02545 664 aaKnown RBP5.57□□□□□ -1.52
VPS8-223ENST00000485024 SCRN1Q12765 414 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 RASGRF1Q13972 1273 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 NOLC1Q14978 699 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS8-223ENST00000485024 PPP2R5EQ16537 467 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 ZNF568Q3ZCX4 644 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 ZNF362Q5T0B9 420 aaPredicted RBP5.57□□□□□ -1.52
VPS8-223ENST00000485024 ZNF669Q96BR6 464 aaPredicted RBP5.57□□□□□ -1.52
VPS8-223ENST00000485024 TRMT2BQ96GJ1 504 aaKnown RBP5.57□□□□□ -1.52
VPS8-223ENST00000485024 GBP3Q9H0R5 595 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 AURKAIP1Q9NWT8 199 aaPredicted RBP5.57□□□□□ -1.52
VPS8-223ENST00000485024 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 HECAQ9UBI9 543 aaPredicted RBP5.57□□□□□ -1.52
VPS8-223ENST00000485024 FBXL7Q9UJT9 491 aa5.57□□□□□ -1.52
VPS8-223ENST00000485024 NACADO15069 1562 aa5.56□□□□□ -1.52
VPS8-223ENST00000485024 A0A0A6YYK5 440 aaPredicted RBP5.56□□□□□ -1.52
VPS8-223ENST00000485024 EPHX1P07099 455 aa5.56□□□□□ -1.52
VPS8-223ENST00000485024 IBSPP21815 317 aaPredicted RBP5.56□□□□□ -1.52
VPS8-223ENST00000485024 GUCY2CP25092 1073 aa5.56□□□□□ -1.52
VPS8-223ENST00000485024 RASA3Q14644 834 aa5.56□□□□□ -1.52
VPS8-223ENST00000485024 GAREM2Q75VX8 874 aa5.56□□□□□ -1.52
VPS8-223ENST00000485024 ADAT2Q7Z6V5 191 aaKnown RBP5.56□□□□□ -1.52
VPS8-223ENST00000485024 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
VPS8-223ENST00000485024 BCL6P41182 706 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 RPL11P62913 178 aaKnown RBP5.55□□□□□ -1.52
VPS8-223ENST00000485024 NCAPHQ15003 741 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 EMC4Q5J8M3 183 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 STEAP3Q658P3 488 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 LARP1BQ659C4 914 aaKnown RBP5.55□□□□□ -1.52
VPS8-223ENST00000485024 HEATR6Q6AI08 1181 aaKnown RBP5.55□□□□□ -1.52
VPS8-223ENST00000485024 SYCE2Q6PIF2 218 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 JAZF1Q86VZ6 243 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 TMPRSS6Q8IU80 811 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 FAM169BQ8N8A8 192 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 ST13P5Q8NFI4 369 aaPredicted RBP5.55□□□□□ -1.52
VPS8-223ENST00000485024 APPBP2Q92624 585 aa5.55□□□□□ -1.52
VPS8-223ENST00000485024 PHAXQ9H814 394 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms