RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 HERC4Q5GLZ8 1057 aaPredicted RBP9.99□□□□□ -0.81
DDX39B-221ENST00000484566 BTNL9Q6UXG8 535 aa9.99□□□□□ -0.81
DDX39B-221ENST00000484566 CHST3Q7LGC8 479 aa9.99□□□□□ -0.81
DDX39B-221ENST00000484566 SIRT2Q8IXJ6 389 aa9.99□□□□□ -0.81
DDX39B-221ENST00000484566 FRMPD2Q68DX3 1309 aaPredicted RBP9.99□□□□□ -0.81
DDX39B-221ENST00000484566 WDR19Q8NEZ3 1342 aa9.99□□□□□ -0.81
DDX39B-221ENST00000484566 FRYLO94915 3013 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 H0Y858 1186 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 H3BNC9 293 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 RANBP6O60518 1105 aaKnown RBP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 IRS1P35568 1242 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 NBL1P41271 181 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 TMEM259Q4ZIN3 620 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 ZNF618Q5T7W0 954 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 TTBK2Q6IQ55 1244 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 SEPT14Q6ZU15 432 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 RPAINQ86UA6 219 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 FBXO11Q86XK2 927 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 SUGP1Q8IWZ8 645 aaKnown RBP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 DHX37Q8IY37 1157 aaKnown RBP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 ADSSL1Q8N142 457 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 CLEC4DQ8WXI8 215 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 KAT2BQ92831 832 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 EDAQ92838 391 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 EMID1Q96A84 441 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 FSD1Q9BTV5 496 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 TLR9Q9NR96 1032 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 IL17RBQ9NRM6 502 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 HDAC6Q9UBN7 1215 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 MUTYHQ9UIF7 546 aa9.98□□□□□ -0.81
DDX39B-221ENST00000484566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
DDX39B-221ENST00000484566 CEP250Q9BV73 2442 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 MAST4O15021 2626 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 AP1G2O75843 785 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
DDX39B-221ENST00000484566 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 ARHGAP1Q07960 439 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 COL19A1Q14993 1142 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 SMAD2Q15796 467 aaKnown RBP9.97□□□□□ -0.81
DDX39B-221ENST00000484566 LY6KQ17RY6 165 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 KIAA0753Q2KHM9 967 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 TMEM192Q8IY95 271 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 UBE2Q2Q8WVN8 375 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 SEPT8Q92599 483 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 TOMM22Q9NS69 142 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 ZBTB40Q9NUA8 1239 aa9.97□□□□□ -0.81
DDX39B-221ENST00000484566 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.81
DDX39B-221ENST00000484566 ATG2AQ2TAZ0 1938 aa9.96□□□□□ -0.81
DDX39B-221ENST00000484566 TMEM221A6NGB7 291 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 RSPH10B2B2RC85 870 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 M0R296 226 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 F2P00734 622 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 RSPH10BP0C881 870 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 ZNF286BP0CG31 522 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 CTNNB1P35222 781 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 THPOP40225 353 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 SMAD4Q13485 552 aaKnown RBP9.96□□□□□ -0.82
DDX39B-221ENST00000484566 PUM1Q14671 1186 aaKnown RBP eCLIP9.96□□□□□ -0.827e-11■□□□□ 8.5
DDX39B-221ENST00000484566 MBTPS1Q14703 1052 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 CLUL1Q15846 466 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 TRIM71Q2Q1W2 868 aaKnown RBP9.96□□□□□ -0.82
DDX39B-221ENST00000484566 USH1GQ495M9 461 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 PPTC7Q8NI37 304 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 NSUN6Q8TEA1 469 aaKnown RBP9.96□□□□□ -0.82
DDX39B-221ENST00000484566 IFIH1Q9BYX4 1025 aaKnown RBP9.96□□□□□ -0.82
DDX39B-221ENST00000484566 RWDD3Q9Y3V2 267 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.82
DDX39B-221ENST00000484566 MYH6P13533 1939 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 STXBP3O00186 592 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 MBTPS2O43462 519 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 UPP2O95045 317 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 PDHBP11177 359 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 RFC5P40937 340 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 NOVP48745 357 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 STXBP2Q15833 593 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 RNF135Q8IUD6 432 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 WNT8BQ93098 351 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 TOP1MTQ969P6 601 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 PPP2R3CQ969Q6 453 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
DDX39B-221ENST00000484566 TMEM47Q9BQJ4 181 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 C11orf84Q9BUA3 381 aaPredicted RBP9.95□□□□□ -0.82
DDX39B-221ENST00000484566 MAF1Q9H063 256 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 LMAN2LQ9H0V9 348 aa9.95□□□□□ -0.82
DDX39B-221ENST00000484566 ABCB11O95342 1321 aa9.94□□□□□ -0.82
DDX39B-221ENST00000484566 C17orf102A2RUQ5 167 aa9.94□□□□□ -0.82
DDX39B-221ENST00000484566 HAS3O00219 553 aa9.94□□□□□ -0.82
DDX39B-221ENST00000484566 ORC4O43929 436 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms