RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
MSH5-216ENST00000484309 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
MSH5-216ENST00000484309 RSPH10B2B2RC85 870 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 BACH1O14867 736 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 TDP2O95551 362 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 RSPH10BP0C881 870 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 GNAT1P11488 350 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 MYOGP15173 224 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 ADAM17P78536 824 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 SETQ01105 290 aaPredicted RBP13.94□□□□□ -0.18
MSH5-216ENST00000484309 PLCB4Q15147 1175 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 DAGLBQ8NCG7 672 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 TRAPPC12Q8WVT3 735 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 LENG9Q96B70 501 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 NKX2-4Q9H2Z4 354 aa13.94□□□□□ -0.18
MSH5-216ENST00000484309 YBX2Q9Y2T7 364 aaKnown RBP13.94□□□□□ -0.18
MSH5-216ENST00000484309 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 M0R2N6 131 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 JAK2O60674 1132 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
MSH5-216ENST00000484309 INSRRP14616 1297 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 ATP2A2P16615 1042 aaKnown RBP13.93□□□□□ -0.18
MSH5-216ENST00000484309 CIITAP33076 1130 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 STAT5BP51692 787 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 INF2Q27J81 1249 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 TMCO2Q7Z6W1 182 aaPredicted RBP13.93□□□□□ -0.18
MSH5-216ENST00000484309 CCDC60Q8IWA6 550 aaPredicted RBP13.93□□□□□ -0.18
MSH5-216ENST00000484309 OXER1Q8TDS5 423 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 MYLIPQ8WY64 445 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 CDX2Q99626 313 aaPredicted RBP13.93□□□□□ -0.18
MSH5-216ENST00000484309 PHF20Q9BVI0 1012 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 MSRAQ9UJ68 235 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 TUBE1Q9UJT0 475 aa13.93□□□□□ -0.18
MSH5-216ENST00000484309 MSH4O15457 936 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 CHMP2AO43633 222 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 ATG7O95352 703 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 CXCL10P02778 98 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 KCNJ6P48051 423 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 DEFB103AP81534 67 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
MSH5-216ENST00000484309 RAB30Q15771 203 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 MARCH8Q5T0T0 291 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 ABHD15Q6UXT9 468 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
MSH5-216ENST00000484309 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
MSH5-216ENST00000484309 KIF2CQ99661 725 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 C22orf23Q9BZE7 217 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
MSH5-216ENST00000484309 ZNF576Q9H609 170 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 ZNF302Q9NR11 478 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 TBC1D22BQ9NU19 505 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 TCEAL9Q9UHQ7 104 aa13.92□□□□□ -0.18
MSH5-216ENST00000484309 COL4A4P53420 1690 aaPredicted RBP13.91□□□□□ -0.18
MSH5-216ENST00000484309 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 POTEB3A0JP26 581 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 FAM205CA6NFA0 338 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
MSH5-216ENST00000484309 XBP1P17861 261 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 USP11P51784 963 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 WDR5P61964 334 aaKnown RBP13.91□□□□□ -0.18
MSH5-216ENST00000484309 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 FAM160B1Q5W0V3 765 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 MIS18BP1Q6P0N0 1132 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 PDXDC2PQ6P474 469 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 POTEBQ6S5H4 581 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 PLPPR4Q7Z2D5 763 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 KRT25Q7Z3Z0 450 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 DBF4BQ8NFT6 615 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 DNAJB3Q8WWF6 145 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 SLC9A7Q96T83 725 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 STXBP5LQ9Y2K9 1186 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 SAMM50Q9Y512 469 aa13.91□□□□□ -0.18
MSH5-216ENST00000484309 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 GAS7O60861 476 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 BAIAP3O94812 1187 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 KRT76Q01546 638 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 TMEM62Q0P6H9 643 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 EARS2Q5JPH6 523 aaKnown RBP13.9□□□□□ -0.18
MSH5-216ENST00000484309 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
MSH5-216ENST00000484309 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 PIK3AP1Q6ZUJ8 805 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 CKAP2LQ8IYA6 745 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 WASF1Q92558 559 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 SLC5A5Q92911 643 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
MSH5-216ENST00000484309 MBLAC1A4D2B0 266 aaPredicted RBP13.89□□□□□ -0.19
MSH5-216ENST00000484309 RRN3P2A6NIE6 340 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 SLC37A4O43826 429 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 CAND2O75155 1236 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms