RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PGRMC1O00264 195 aaKnown RBP21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 SCP2P22307 547 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 FAM26FQ5R3K3 315 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.61■■□□□ 1.058e-7■■■■■ 32.7
RPUSD3-216ENST00000484134 CELF4Q9BZC1 486 aaKnown RBP21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 UBA5Q9GZZ9 404 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 PANK4Q9NVE7 773 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 BTG4Q9NY30 223 aa21.61■■□□□ 1.05
RPUSD3-216ENST00000484134 MYH14Q7Z406 1995 aaKnown RBP21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 KRIT1O00522 736 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 TTI1O43156 1089 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 ITPK1Q13572 414 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 CALR3Q96L12 384 aaKnown RBP21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 SCLT1Q96NL6 688 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 XRCC4Q13426 336 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 KRT79Q5XKE5 535 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 CEP63Q96MT8 703 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 SAP30BPQ9UHR5 308 aaKnown RBP21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 PCDHA2Q9Y5H9 948 aa21.6■■□□□ 1.05
RPUSD3-216ENST00000484134 SLC9A1P19634 815 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 CACNB1Q02641 598 aaPredicted RBP21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 DHX9Q08211 1270 aaKnown RBP21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 PDIA5Q14554 519 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 E2F5Q15329 346 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 TMEM266Q2M3C6 531 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 KRT71Q3SY84 523 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 DZIP1Q86YF9 867 aaKnown RBP21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 TPCN2Q8NHX9 752 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 ABCA3Q99758 1704 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 ROBO3Q96MS0 1386 aa21.59■■□□□ 1.05
RPUSD3-216ENST00000484134 NPHP3-ACAD11A0A0J9YXS1 232 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 F8VZ95 297 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 NF2P35240 595 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 MARSP56192 900 aaKnown RBP21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 HVCN1Q96D96 273 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 NAGPAQ9UK23 515 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 A0A0G2JS52 829 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 KCNH2Q12809 1159 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 ORC2Q13416 577 aaPredicted RBP21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 GKAP1Q5VSY0 366 aaPredicted RBP21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 CPLX4Q7Z7G2 160 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 TGFBRAP1Q8WUH2 860 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 COA7Q96BR5 231 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 DPH5Q9H2P9 285 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 KCTD10Q9H3F6 313 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 NR2E1Q9Y466 385 aa21.58■■□□□ 1.05
RPUSD3-216ENST00000484134 MTMR3Q13615 1198 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 DIXDC1Q155Q3 683 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 GRIK5Q16478 980 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 SCFD1Q8WVM8 642 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 SEC63Q9UGP8 760 aaKnown RBP21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 TMCO5BA8MYB1 307 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 KIF1CO43896 1103 aaKnown RBP21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 ALKBH5Q6P6C2 394 aaKnown RBP21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 RBM46Q8TBY0 533 aaKnown RBP21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 SEC14L1Q92503 715 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 TLCD1Q96CP7 247 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 UIMC1Q96RL1 719 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 STXBP5LQ9Y2K9 1186 aa21.57■■□□□ 1.04
RPUSD3-216ENST00000484134 SF3A3Q12874 501 aaKnown RBP eCLIP21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 RASGEF1CQ8N431 466 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 MAGEC3Q8TD91 643 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 PSMD1Q99460 953 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 VEZTQ9HBM0 779 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 PPIP5K2O43314 1243 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 MGRN1O60291 552 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 ADAM9Q13443 819 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 ERMARDQ5T6L9 678 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 HAS1Q92839 578 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 MIEF2Q96C03 454 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 XPO6Q96QU8 1125 aaKnown RBP21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 TRIM51Q9BSJ1 452 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 PNMA2Q9UL42 364 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 ATAD5Q96QE3 1844 aa21.56■■□□□ 1.04
RPUSD3-216ENST00000484134 USP17L5A8MUK1 530 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 CAND2O75155 1236 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 GNA14O95837 355 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 POU5F1Q01860 360 aaKnown RBP21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 PEX26Q7Z412 305 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 SLFN11Q7Z7L1 901 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 MAPKAPK5Q8IW41 473 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 FAM212AQ96EL1 285 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 TRIM31Q9BZY9 425 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 LRRC27Q9C0I9 530 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 KDM4CQ9H3R0 1056 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 ESYT2A0FGR8 921 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 E9PMD0 336 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 CCDC188H7C350 402 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 UCHL3P15374 230 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 C10orf76Q5T2E6 689 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 EP400NLQ6ZTU2 488 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 ATP8B4Q8TF62 1192 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 TXLNGYQ9BZA5 131 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 RAB34Q9BZG1 259 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 AJAP1Q9UKB5 411 aaPredicted RBP21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 ATP8A1Q9Y2Q0 1164 aa21.55■■□□□ 1.04
RPUSD3-216ENST00000484134 DNAJC8O75937 253 aaPredicted RBP21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 SHBGP04278 402 aa21.54■■□□□ 1.04
RPUSD3-216ENST00000484134 ELF3P78545 371 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms