RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 POU4F2Q12837 409 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 PPP2R5CQ13362 524 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 SPARCL1Q14515 664 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 POSTNQ15063 836 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 ANO6Q4KMQ2 910 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 HECTD3Q5T447 861 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 GTF2IRD2BQ6EKJ0 949 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 MRPL14Q6P1L8 145 aaKnown RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 GGT6Q6P531 493 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 USP45Q70EL2 814 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 GTF2IRD2Q86UP8 949 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 CACNA2D3Q8IZS8 1091 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 FAM13CQ8NE31 585 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 ADCY4Q8NFM4 1077 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 POP1Q99575 1024 aaKnown RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 NOC2LQ9Y3T9 749 aaKnown RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 ZNF451Q9Y4E5 1061 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 RGS13O14921 159 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 P4HA2O15460 535 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 FFAR2O15552 330 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 AHCYL1O43865 530 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 YARSP54577 528 aaKnown RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 SLC35F1Q5T1Q4 408 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 SAMD5Q5TGI4 173 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 FAM205BPQ63HN1 556 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 IQCEQ6IPM2 695 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 KCNT2Q6UVM3 1135 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 NRSN1Q8IZ57 195 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 SSH1Q8WYL5 1049 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 C1orf159Q96HA4 380 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 SPAG5Q96R06 1193 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 CELF4Q9BZC1 486 aaKnown RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 ZC3H12CQ9C0D7 883 aaKnown RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 ZNF277Q9NRM2 450 aaPredicted RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 ARGLU1Q9NWB6 273 aaPredicted RBP9.28□□□□□ -0.92
LSM5-210ENST00000480956 JAG2Q9Y219 1238 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 PCDHA11Q9Y5I1 949 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 SNX13Q9Y5W8 968 aa9.28□□□□□ -0.92
LSM5-210ENST00000480956 TISP43B9A030 160 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 B9A039 149 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 ARVCFO00192 962 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 TGM5O43548 720 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 AKR1B1P15121 316 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 PTPRAP18433 802 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 PDCP20941 246 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 C5AR1P21730 350 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 PDIA3P30101 505 aaKnown RBP9.27□□□□□ -0.93
LSM5-210ENST00000480956 LIFRP42702 1097 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 POLD3Q15054 466 aaPredicted RBP9.27□□□□□ -0.93
LSM5-210ENST00000480956 PRSS53Q2L4Q9 553 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 RADILQ96JH8 1075 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 CCDC68Q9H2F9 335 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 ATP8A2Q9NTI2 1148 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.27□□□□□ -0.93
LSM5-210ENST00000480956 AASSQ9UDR5 926 aa9.27□□□□□ -0.93
LSM5-210ENST00000480956 PRAMEF27A3QJZ7 478 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 DTNBO60941 627 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 ZBTB48P10074 688 aaPredicted RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 MYCLP12524 364 aaPredicted RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 CD247P20963 164 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 GRK4P32298 578 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 MECP2P51608 486 aaKnown RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 COPAP53621 1224 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 PSMC1P62191 440 aaKnown RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 PGS1Q32NB8 556 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 DHX32Q7L7V1 743 aaKnown RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 VN1R5Q7Z5H4 357 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 ARHGEF39Q8N4T4 335 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 TGFBRAP1Q8WUH2 860 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 MPHOSPH8Q99549 860 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 BTBD1Q9H0C5 482 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 MAGEH1Q9H213 219 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 DNAJC28Q9NX36 388 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 CGGBP1Q9UFW8 167 aaPredicted RBP9.26□□□□□ -0.93
LSM5-210ENST00000480956 IGF1RP08069 1367 aa9.26□□□□□ -0.93
LSM5-210ENST00000480956 TRIM64CA6NLI5 447 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 CHL1O00533 1208 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 UBOX5O94941 541 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 MTHFD1P11586 935 aaKnown RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 HTR1BP28222 390 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 ECI1P42126 302 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 TDO2P48775 406 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 BPIFB3P59826 476 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 PPP2R5DQ14738 602 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 WDR44Q5JSH3 913 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 APOA5Q6Q788 366 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 ASB2Q96Q27 587 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 BAG1Q99933 345 aaPredicted RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 MAFFQ9ULX9 164 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 A0A087X0M5 115 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 A0A1B0GX30 115 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 F5H0A9 414 aaPredicted RBP9.25□□□□□ -0.93
LSM5-210ENST00000480956 CKMP06732 381 aa9.25□□□□□ -0.93
LSM5-210ENST00000480956 SRGAP2CP0DJJ0 459 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms