RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CCDC24Q8N4L8 307 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 TGFBRAP1Q8WUH2 860 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 MIEF2Q96C03 454 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 MTMR9Q96QG7 549 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 CCDC87Q9NVE4 849 aa22.64■■□□□ 1.21
COL13A1-208ENST00000479733 CLSTN1O94985 981 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 CLNS1AP54105 237 aaKnown RBP22.63■■□□□ 1.21
COL13A1-208ENST00000479733 TMC3Q7Z5M5 1100 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 SELENOSQ9BQE4 189 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.63■■□□□ 1.21
COL13A1-208ENST00000479733 BCL9O00512 1426 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 PRPF4BQ13523 1007 aaKnown RBP22.63■■□□□ 1.21
COL13A1-208ENST00000479733 PBKQ96KB5 322 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 PSMD1Q99460 953 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 BSDC1Q9NW68 430 aaPredicted RBP22.63■■□□□ 1.21
COL13A1-208ENST00000479733 ANKRD36CQ5JPF3 1778 aa22.63■■□□□ 1.21
COL13A1-208ENST00000479733 SRRM3A6NNA2 597 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 F8W031 263 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 KIF1CO43896 1103 aaKnown RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 CAND2O75155 1236 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 MYCNP04198 464 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 KCNH2Q12809 1159 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 ADAM9Q13443 819 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 DIXDC1Q155Q3 683 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 ZCWPW2Q504Y3 356 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 ALKBH5Q6P6C2 394 aaKnown RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 FBXO33Q7Z6M2 555 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 TXNRD3Q86VQ6 643 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 MAPKAPK5Q8IW41 473 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 TCP11Q8WWU5 503 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 CCT6BQ92526 530 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 CASZ1Q86V15 1759 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 DRD4P21917 467 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 TNNI2P48788 182 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 HERC4Q5GLZ8 1057 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 DAAM2Q86T65 1068 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 PNMA8AQ86V59 439 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 PROM2Q8N271 834 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 UHMK1Q8TAS1 419 aaKnown RBP22.62■■□□□ 1.21
COL13A1-208ENST00000479733 ACTRT1Q8TDG2 376 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 AIPL1Q9NZN9 384 aa22.62■■□□□ 1.21
COL13A1-208ENST00000479733 ACCSLQ4AC99 568 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 TRIM59Q8IWR1 403 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 NR2E1Q9Y466 385 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.61■■□□□ 1.21
COL13A1-208ENST00000479733 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 FRMPD2Q68DX3 1309 aaPredicted RBP22.61■■□□□ 1.21
COL13A1-208ENST00000479733 TAF1P21675 1872 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 KDM4FA0A1W2PPD8 638 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 F8VZ95 297 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 CLTAP09496 248 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 PAX7P23759 505 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 GBP2P32456 591 aaPredicted RBP22.61■■□□□ 1.21
COL13A1-208ENST00000479733 MTMR3Q13615 1198 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 DNAJC19Q96DA6 116 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 CHMP6Q96FZ7 201 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 BTG4Q9NY30 223 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 MYH1P12882 1939 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 SHANK3Q9BYB0 1731 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 SHBGP04278 402 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 AGBL2Q5U5Z8 902 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 LRRC57Q8N9N7 239 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL13A1-208ENST00000479733 ACSBG1Q96GR2 724 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 GANQ9H2C0 597 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 NAGPAQ9UK23 515 aa22.61■■□□□ 1.21
COL13A1-208ENST00000479733 E9PMD0 336 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 NAA25Q14CX7 972 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 IRF2BP2Q7Z5L9 587 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 A0A1B0GUL6 1792 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 PSMD2Q13200 908 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 FAM133BQ5BKY9 247 aaKnown RBP22.6■■□□□ 1.21
COL13A1-208ENST00000479733 SMIM5Q71RC9 77 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 TPCN2Q8NHX9 752 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 XPO6Q96QU8 1125 aaKnown RBP22.6■■□□□ 1.21
COL13A1-208ENST00000479733 RAB34Q9BZG1 259 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 GGT7Q9UJ14 662 aa22.6■■□□□ 1.21
COL13A1-208ENST00000479733 UTP11Q9Y3A2 253 aaKnown RBP22.6■■□□□ 1.21
COL13A1-208ENST00000479733 C5orf60A6NFR6 353 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 TRIM37O94972 964 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 CCDC50Q8IVM0 306 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 FGGP02679 453 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 FXR2P51116 673 aaKnown RBP eCLIP22.59■■□□□ 1.21
COL13A1-208ENST00000479733 ELF3P78545 371 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-208ENST00000479733 XRCC4Q13426 336 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 C3orf20Q8ND61 904 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 CCDC26Q8TAB7 109 aa22.59■■□□□ 1.21
COL13A1-208ENST00000479733 TACO1Q9BSH4 297 aaKnown RBP22.59■■□□□ 1.21
COL13A1-208ENST00000479733 NEBLO76041 1014 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 CHN1P15882 459 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 GCFC2P16383 781 aaKnown RBP22.58■■□□□ 1.21
COL13A1-208ENST00000479733 RASA1P20936 1047 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 UBE2SQ16763 222 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 DCAF17Q5H9S7 520 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-208ENST00000479733 TBC1D1Q86TI0 1168 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-208ENST00000479733 CCDC197Q8NCU1 140 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 BMP2KQ9NSY1 1161 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-208ENST00000479733 EDIL3O43854 480 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 MMEP08473 750 aa22.58■■□□□ 1.21
COL13A1-208ENST00000479733 TCERG1LQ5VWI1 586 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms