RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 USP17L19D6RCP7 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L20D6RJB6 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 POLRMTO00411 1230 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 ACTN3Q08043 901 aaPredicted RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L24Q0WX57 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 MEI1Q5TIA1 1274 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L6PQ6QN14 398 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 YTHDF3Q7Z739 585 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 CYFIP2Q96F07 1278 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 NEUROG2Q9H2A3 272 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 LRRC4CQ9HCJ2 640 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 SSU72P8A0A1W2PR75 194 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 RBAK-RBAKDNI3L0D1 243 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 SNHG28P0DPA3 235 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 HSD17B3P37058 310 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 POLR2FP61218 127 aaKnown RBP14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 ZNF543Q08ER8 600 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 NAB2Q15742 525 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 C6orf89Q6UWU4 347 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 IQCDQ96DY2 449 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 ADAMTS1Q9UHI8 967 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 GRID2IPA4D2P6 1211 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 FLT3P36888 993 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 AMPD3Q01432 767 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 HLTFQ14527 1009 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 CCDC40Q4G0X9 1142 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 COBLL1Q53SF7 1204 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 TMBIM4Q9HC24 238 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 KLC4Q9NSK0 619 aa14.6□□□□□ -0.07
PDZRN3-208ENST00000479530 DCDC2CA8MYV0 355 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 H0YGN5 161 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 RASSF9O75901 435 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 SSBP05455 408 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 HSPA9P38646 679 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 FXR2P51116 673 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 TCP10Q12799 353 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 KIAA0753Q2KHM9 967 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 CDC42EP5Q6NZY7 148 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 UNC13DQ70J99 1090 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 SPATS2Q86XZ4 545 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 RAD54LQ92698 747 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 OSBPL7Q9BZF2 842 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 SERPINB13Q9UIV8 391 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 NFS1Q9Y697 457 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 ESYT2A0FGR8 921 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 HMGB1P1B2RPK0 211 aaPredicted RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 DNM1LO00429 736 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 HOXA10P31260 410 aaPredicted RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 MICALCLQ6ZW33 695 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 GUF1Q8N442 669 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 WHAMMQ8TF30 809 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 CDK5RAP3Q96JB5 506 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 P2RX7Q99572 595 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 AP1M1Q9BXS5 423 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 SLC40A1Q9NP59 571 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 DDX20Q9UHI6 824 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 TSKSQ9UJT2 592 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 PCDHGC5Q9Y5F6 944 aa14.59□□□□□ -0.07
PDZRN3-208ENST00000479530 CDK5RAP2Q96SN8 1893 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 E9PMD0 336 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 SMARCA1P28370 1054 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 STAT3P40763 770 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 PPP1R2P41236 205 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 SFMBT2Q5VUG0 894 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 LSM14BQ9BX40 385 aaKnown RBP14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 BCAS3Q9H6U6 928 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 DNAJC18Q9H819 358 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 RNF14Q9UBS8 474 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 CNOT8Q9UFF9 292 aaKnown RBP14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 SLC12A6Q9UHW9 1150 aa14.58□□□□□ -0.07
PDZRN3-208ENST00000479530 UTRNP46939 3433 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 KCNK3O14649 394 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 TTLL1O95922 423 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 SERPING1P05155 500 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 MYBP10242 640 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 SMTNP53814 917 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 ZNF844Q08AG5 666 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 APOBEC3HQ6NTF7 200 aaKnown RBP14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 PROM2Q8N271 834 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 FAM133AQ8N9E0 248 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 TBC1D22AQ8WUA7 517 aa14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 TAF1DQ9H5J8 278 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 DDX25Q9UHL0 483 aaKnown RBP14.58□□□□□ -0.08
PDZRN3-208ENST00000479530 PNMA6FA0A0J9YX94 578 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 TRIM37O94972 964 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 NT5C2P49902 561 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 RAPGEF1Q13905 1077 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 SLC18A3Q16572 532 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 ASPRV1Q53RT3 343 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 DNAJC19Q96DA6 116 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 RIC8AQ9NPQ8 531 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 TMEM59LQ9UK28 342 aa14.57□□□□□ -0.08
PDZRN3-208ENST00000479530 ATP6V0A2Q9Y487 856 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms