RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 KLHL23Q8NBE8 558 aa19.82■□□□□ 0.76
VIM-204ENST00000478746 GIMAP8Q8ND71 665 aaPredicted RBP19.82■□□□□ 0.76
VIM-204ENST00000478746 CDY2AQ9Y6F7 541 aa19.82■□□□□ 0.76
VIM-204ENST00000478746 ZDBF2Q9HCK1 2354 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 TCF7P36402 384 aaPredicted RBP19.81■□□□□ 0.76
VIM-204ENST00000478746 HDAC1Q13547 482 aaPredicted RBP19.81■□□□□ 0.76
VIM-204ENST00000478746 GRM4Q14833 912 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 GRIK4Q16099 956 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 CYB5R4Q7L1T6 521 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 RTN4RL1Q86UN2 441 aaPredicted RBP19.81■□□□□ 0.76
VIM-204ENST00000478746 NLRX1Q86UT6 975 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 POF1BQ8WVV4 589 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 PHF7Q9BWX1 381 aaPredicted RBP19.81■□□□□ 0.76
VIM-204ENST00000478746 AGO3Q9H9G7 860 aaKnown RBP19.81■□□□□ 0.76
VIM-204ENST00000478746 TUBE1Q9UJT0 475 aa19.81■□□□□ 0.76
VIM-204ENST00000478746 USP15Q9Y4E8 981 aaPredicted RBP19.81■□□□□ 0.76
VIM-204ENST00000478746 CYTH3O43739 400 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 CD52P31358 61 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 SIGLEC14Q08ET2 396 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
VIM-204ENST00000478746 PCNX4Q63HM2 1172 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 XRRA1Q6P2D8 792 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 NPAS4Q8IUM7 802 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 SEPT1Q8WYJ6 367 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 RPGRIP1Q96KN7 1286 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 FTHL17Q9BXU8 183 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 ERAP1Q9NZ08 941 aa19.8■□□□□ 0.76
VIM-204ENST00000478746 BARX2Q9UMQ3 279 aaPredicted RBP19.8■□□□□ 0.76
VIM-204ENST00000478746 ZFHX2Q9C0A1 2572 aaPredicted RBP19.79■□□□□ 0.76
VIM-204ENST00000478746 MBLAC1A4D2B0 266 aaPredicted RBP19.79■□□□□ 0.76
VIM-204ENST00000478746 HIP1O00291 1037 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 GFRA3O60609 400 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 STAG3L1P0CL83 205 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 MARK3P27448 753 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 MRPS6P82932 125 aaKnown RBP19.79■□□□□ 0.76
VIM-204ENST00000478746 IER5Q5VY09 327 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 CRIPAKQ8N1N5 446 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 SMARCC2Q8TAQ2 1214 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 MICAL1Q8TDZ2 1067 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 LINC01599Q8WXQ3 324 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 PIBF1Q8WXW3 757 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 GLG1Q92896 1179 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 IRF2BPLQ9H1B7 796 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 TLE6Q9H808 572 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 CFAP54Q96N23 3096 aa19.79■□□□□ 0.76
VIM-204ENST00000478746 PPFIA3O75145 1194 aa19.78■□□□□ 0.76
VIM-204ENST00000478746 GLP2RO95838 553 aa19.78■□□□□ 0.76
VIM-204ENST00000478746 MARCH8Q5T0T0 291 aa19.78■□□□□ 0.76
VIM-204ENST00000478746 CUL5Q93034 780 aa19.78■□□□□ 0.76
VIM-204ENST00000478746 FAM86C1Q9NVL1 165 aa19.78■□□□□ 0.76
VIM-204ENST00000478746 SQORQ9Y6N5 450 aa19.78■□□□□ 0.76
VIM-204ENST00000478746 GSTTP1A0A1W2PQM5 241 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 ATP9AO75110 1047 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 RPLP2P05387 115 aaKnown RBP19.77■□□□□ 0.76
VIM-204ENST00000478746 AVPR2P30518 371 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 IGBP1P78318 339 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 TRDNQ13061 729 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 USP17L6PQ6QN14 398 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 ATOH1Q92858 354 aaPredicted RBP19.77■□□□□ 0.76
VIM-204ENST00000478746 FAM49AQ9H0Q0 323 aaPredicted RBP19.77■□□□□ 0.76
VIM-204ENST00000478746 SMARCAD1Q9H4L7 1026 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 LRFN2Q9ULH4 789 aa19.77■□□□□ 0.76
VIM-204ENST00000478746 ERICH2A1L162 156 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 RRN3P2A6NIE6 340 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 M0QZ92 97 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 IFIT3O14879 490 aaKnown RBP19.76■□□□□ 0.75
VIM-204ENST00000478746 PER2O15055 1255 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 SCG2P13521 617 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 ATF7P17544 494 aaPredicted RBP19.76■□□□□ 0.75
VIM-204ENST00000478746 VCPP55072 806 aaKnown RBP19.76■□□□□ 0.75
VIM-204ENST00000478746 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 PLEKHM2Q8IWE5 1019 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 GPRASP2Q96D09 838 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 ASIC4Q96FT7 647 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 CDHR1Q96JP9 859 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 PADI3Q9ULW8 664 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 PCDHGC5Q9Y5F6 944 aa19.76■□□□□ 0.75
VIM-204ENST00000478746 KIAA1671Q9BY89 1806 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 KCNA2P16389 499 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 SPOUT1Q5T280 376 aaKnown RBP19.75■□□□□ 0.75
VIM-204ENST00000478746 ZBTB10Q96DT7 871 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 OSBPL3Q9H4L5 887 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 PCDHB12Q9Y5F1 795 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 TRPV2Q9Y5S1 764 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 CACNA1HO95180 2353 aa19.75■□□□□ 0.75
VIM-204ENST00000478746 KMT2EQ8IZD2 1858 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 PIK3CDO00329 1044 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 MEIS2O14770 477 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 INSRRP14616 1297 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 GATMP50440 423 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 UBE3AQ05086 875 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 TMEM62Q0P6H9 643 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 TROAPQ12815 778 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 PAK2Q13177 524 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 ATP8B4Q8TF62 1192 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 SUSD6Q92537 303 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 SENP2Q9HC62 589 aa19.74■□□□□ 0.75
VIM-204ENST00000478746 PTPRZ1P23471 2315 aaPredicted RBP19.74■□□□□ 0.75
VIM-204ENST00000478746 FSD2A1L4K1 749 aa19.73■□□□□ 0.75
VIM-204ENST00000478746 IBSPP21815 317 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms