RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 NUGGCQ68CJ6 796 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 SDR42E1Q8WUS8 393 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 INTS9Q9NV88 658 aaKnown RBP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 FGFR1OP2Q9NVK5 253 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 PHF8Q9UPP1 1060 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 SCN11AQ9UI33 1791 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 KRIT1O00522 736 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 GM2AP17900 193 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 GNAZP19086 355 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 ASIC1P78348 528 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 MXRA7P84157 204 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 TROAPQ12815 778 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 MTMR3Q13615 1198 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 ASRGL1Q7L266 308 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 FAM114A1Q8IWE2 563 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 GALNT15Q8N3T1 639 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 EIF1ADQ8N9N8 165 aaKnown RBP10.73□□□□□ -0.69
COL13A1-207ENST00000478219 B4GALNT2Q8NHY0 566 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 RMDN2Q96LZ7 410 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 RPS6KC1Q96S38 1066 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 MLXIPLQ9NP71 852 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 TIAM2Q8IVF5 1701 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 CNTNAP5Q8WYK1 1306 aa10.73□□□□□ -0.69
COL13A1-207ENST00000478219 GPR75-ASB3A0A0A6YYF3 556 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 BICDL2A1A5D9 508 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 NMT2O60551 498 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 CREB1P16220 341 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 KCNA6P17658 529 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 PLCD4Q9BRC7 762 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 PYM1Q9BRP8 204 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 ASB3Q9Y575 518 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 SMAPO00193 183 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 PPFIA2O75334 1257 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 PYGBP11216 843 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 UBA7P41226 1012 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 RANBP1P43487 201 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 POLR2FP61218 127 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 MGAT5Q09328 741 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 PDCD2Q16342 344 aaPredicted RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 IFI16Q16666 785 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 FOXB2Q5VYV0 432 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 ARL6IP4Q66PJ3 421 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 MTHFD1LQ6UB35 978 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 TMTC2Q8N394 836 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 MGARPQ8TDB4 240 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 EPS8L3Q8TE67 593 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 TAF4BQ92750 862 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 PCMTD2Q9NV79 361 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 FLT1P17948 1338 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 RAD21O60216 631 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 RFC5P40937 340 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 USP11P51784 963 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 IFIT5Q13325 482 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 SLC18A3Q16572 532 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 MAN2A1Q16706 1144 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 SLC9C1Q4G0N8 1177 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 ADAT2Q7Z6V5 191 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 VGLL2Q8N8G2 317 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 FAM133AQ8N9E0 248 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 ACTRT1Q8TDG2 376 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 TANGO6Q9C0B7 1094 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 OCEL1Q9H607 264 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 GREM2Q9H772 168 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 DBR1Q9UK59 544 aaKnown RBP10.72□□□□□ -0.69
COL13A1-207ENST00000478219 LRRC42Q9Y546 428 aa10.72□□□□□ -0.69
COL13A1-207ENST00000478219 TCP11X1B4DZS4 312 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
COL13A1-207ENST00000478219 POU5F1Q01860 360 aaKnown RBP10.71□□□□□ -0.69
COL13A1-207ENST00000478219 SLC29A2Q14542 456 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 LRRC41Q15345 812 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 CENPPQ6IPU0 288 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 TMTC3Q6ZXV5 915 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 LONP2Q86WA8 852 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 LRRC57Q8N9N7 239 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 UCMAQ8WVF2 138 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 SEC14L1Q92503 715 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 GLG1Q92896 1179 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 FMO2Q99518 471 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.69
COL13A1-207ENST00000478219 CCDC113Q9H0I3 377 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 RAB17Q9H0T7 212 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 WDR35Q9P2L0 1181 aa10.71□□□□□ -0.69
COL13A1-207ENST00000478219 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.7
COL13A1-207ENST00000478219 GLI3P10071 1580 aa10.71□□□□□ -0.7
COL13A1-207ENST00000478219 PGRMC1O00264 195 aaKnown RBP10.71□□□□□ -0.7
COL13A1-207ENST00000478219 CYP27B1O15528 508 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms