RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 RDM1Q8NG50 284 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 KCNG4Q8TDN1 519 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
SEC13-215ENST00000477547 FERMT2Q96AC1 680 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 DISC1Q9NRI5 854 aa17.23■□□□□ 0.35
SEC13-215ENST00000477547 MORC2Q9Y6X9 1032 aaPredicted RBP17.23■□□□□ 0.35
SEC13-215ENST00000477547 GSTTP1A0A1W2PQM5 241 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 EML1O00423 815 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 DNM1LO00429 736 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 BACH1O14867 736 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 LGALS2P05162 132 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 PSAPP07602 524 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 IL17AQ16552 155 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
SEC13-215ENST00000477547 NECAB2Q7Z6G3 386 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 CCDC60Q8IWA6 550 aaPredicted RBP17.22■□□□□ 0.35
SEC13-215ENST00000477547 PCSK9Q8NBP7 692 aaKnown RBP17.22■□□□□ 0.35
SEC13-215ENST00000477547 SPATA32Q96LK8 384 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 FBXO2Q9UK22 296 aaPredicted RBP17.22■□□□□ 0.35
SEC13-215ENST00000477547 IGSF9BQ9UPX0 1349 aa17.22■□□□□ 0.35
SEC13-215ENST00000477547 PURAQ00577 322 aaKnown RBP17.21■□□□□ 0.35
SEC13-215ENST00000477547 GRIN1Q05586 938 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 KCNA10Q16322 511 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 ABHD15Q6UXT9 468 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
SEC13-215ENST00000477547 ERMNQ8TAM6 284 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 LEO1Q8WVC0 666 aaPredicted RBP17.21■□□□□ 0.35
SEC13-215ENST00000477547 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
SEC13-215ENST00000477547 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
SEC13-215ENST00000477547 PCDHA10Q9Y5I2 948 aa17.21■□□□□ 0.35
SEC13-215ENST00000477547 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
SEC13-215ENST00000477547 MOXD2PA6NHM9 499 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 KPNA6O60684 536 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 PPP6R2O75170 966 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 PPFIA4O75335 1185 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 ATG7O95352 703 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 F2P00734 622 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 ASGR1P07306 291 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.34
SEC13-215ENST00000477547 ACLYP53396 1101 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 LRIT3Q3SXY7 679 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 HAUS3Q68CZ6 603 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 CCSAPQ6IQ19 270 aaPredicted RBP17.21■□□□□ 0.34
SEC13-215ENST00000477547 CXCL17Q6UXB2 119 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 NEK9Q8TD19 979 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 GLG1Q92896 1179 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 ZNF302Q9NR11 478 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.34
SEC13-215ENST00000477547 SRPRBQ9Y5M8 271 aaKnown RBP17.21■□□□□ 0.34
SEC13-215ENST00000477547 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 LGR5O75473 907 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 LONP1P36776 959 aaKnown RBP17.2■□□□□ 0.34
SEC13-215ENST00000477547 ME1P48163 572 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 CYP4A11Q02928 519 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 EPHA7Q15375 998 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 UGCGQ16739 394 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 ANKLE1Q8NAG6 615 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 BANK1Q8NDB2 785 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 CLIC6Q96NY7 704 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 PCYT2Q99447 389 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 EIF2AK1Q9BQI3 630 aaKnown RBP17.2■□□□□ 0.34
SEC13-215ENST00000477547 LXNQ9BS40 222 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
SEC13-215ENST00000477547 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
SEC13-215ENST00000477547 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 GABBR1Q9UBS5 961 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 PHF24Q9UPV7 400 aa17.2■□□□□ 0.34
SEC13-215ENST00000477547 IGKV6D-21A0A0A0MT36 114 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 A0A1W2PQ45 241 aaPredicted RBP17.19■□□□□ 0.34
SEC13-215ENST00000477547 A0A1W2PQY0 241 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 MARK3P27448 753 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 CHMP4BP1P59074 171 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 PDIA5Q14554 519 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 SWSAP1Q6NVH7 229 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 PDXDC2PQ6P474 469 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 TDHQ8IZJ6 230 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 DYDC2Q96IM9 177 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 AK8Q96MA6 479 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 C16orf70Q9BSU1 422 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 KATNAL1Q9BW62 490 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 SMARCAD1Q9H4L7 1026 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 ERAP1Q9NZ08 941 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
SEC13-215ENST00000477547 EVPLQ92817 2033 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 CUTAO60888 179 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 CABYRO75952 493 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 CAPN2P17655 700 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
SEC13-215ENST00000477547 STAT5BP51692 787 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 PRKCEQ02156 737 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 MFSD10Q14728 455 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms