RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 PPP2R5CQ13362 524 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 SPA17Q15506 151 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 EDRF1Q3B7T1 1238 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 PDXDC1Q6P996 788 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 CACNA2D4Q7Z3S7 1137 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 TRIM59Q8IWR1 403 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 BAP1Q92560 729 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 HSD17B14Q9BPX1 270 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 LSM14BQ9BX40 385 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 LACRTQ9GZZ8 138 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 POLD4Q9HCU8 107 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 TUFT1Q9NNX1 390 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 CCPG1Q9ULG6 757 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 PHF20L1A8MW92 1017 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 SLITRK3O94933 977 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 TFRCP02786 760 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 ARP10275 920 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 KNOP1Q1ED39 458 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 RBBP6Q7Z6E9 1792 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 EHBP1Q8NDI1 1231 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 EDEM3Q9BZQ6 932 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 BCAS3Q9H6U6 928 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 MYO6Q9UM54 1294 aa12.16□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF263O14978 683 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 CALUO43852 315 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 ICAM1P05362 532 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 NR2F2P24468 414 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 HOXD13P35453 343 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 KIF11P52732 1056 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 VAV2P52735 878 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 AMPD2Q01433 879 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 TNIP1Q15025 636 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 TMCO3Q6UWJ1 677 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 HOOK2Q96ED9 719 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 CRACR2AQ9BSW2 395 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 UNC45AQ9H3U1 944 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 NLRC4Q9NPP4 1024 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 FAM184BQ9ULE4 1060 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF536O15090 1300 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 ENC1O14682 589 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 NOL4O94818 638 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 FAM13AO94988 1023 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 GCNT3O95395 438 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 EGFRP00533 1210 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 GAP43P17677 238 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 EPS15P42566 896 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 HSD17B4P51659 736 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF280AP59817 542 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 TEPSINQ96N21 525 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 PARD6BQ9BYG5 372 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 CEP72Q9P209 647 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 PCDHA13Q9Y5I0 950 aa12.15□□□□□ -0.46
HLA-DMB-260ENST00000477537 SFI1A8K8P3 1242 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 PDXKO00764 312 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 ZBTB39O15060 712 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 AKR1B10O60218 316 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 ATP1A1P05023 1023 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 BMS1Q14692 1282 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 BMT2Q1RMZ1 405 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 TEKT3Q9BXF9 490 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 HDAC6Q9UBN7 1215 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 DUSP10Q9Y6W6 482 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 LTBP3Q9NS15 1303 aa12.14□□□□□ -0.47
HLA-DMB-260ENST00000477537 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 MACROD2A1Z1Q3 448 aa12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 NFIBO00712 420 aa12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 SEC31AO94979 1220 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 POLR2FP61218 127 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 APBA1Q02410 837 aa12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
HLA-DMB-260ENST00000477537 DGKZQ13574 1117 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms