RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SENP7Q9BQF6 1050 aa19■□□□□ 0.63
APOBEC3F-203ENST00000476513 DSCC1Q9BVC3 393 aa19■□□□□ 0.63
APOBEC3F-203ENST00000476513 AGO3Q9H9G7 860 aaKnown RBP19■□□□□ 0.63
APOBEC3F-203ENST00000476513 FAM86C1Q9NVL1 165 aa19■□□□□ 0.63
APOBEC3F-203ENST00000476513 BARX2Q9UMQ3 279 aaPredicted RBP19■□□□□ 0.63
APOBEC3F-203ENST00000476513 CDY2AQ9Y6F7 541 aa19■□□□□ 0.63
APOBEC3F-203ENST00000476513 PNMA6FA0A0J9YX94 578 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 MBLAC1A4D2B0 266 aaPredicted RBP18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 GFRA3O60609 400 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 CD52P31358 61 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 TCF7P36402 384 aaPredicted RBP18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 SIGLEC14Q08ET2 396 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 GRM4Q14833 912 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 GRIK4Q16099 956 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 MARCH8Q5T0T0 291 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 CYB5R4Q7L1T6 521 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 PHF7Q9BWX1 381 aaPredicted RBP18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 LNPKQ9C0E8 428 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 TUBE1Q9UJT0 475 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 PCDHGC5Q9Y5F6 944 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 TRIOO75962 3097 aa18.99■□□□□ 0.63
APOBEC3F-203ENST00000476513 VCPP55072 806 aaKnown RBP18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 HDAC1Q13547 482 aaPredicted RBP18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 PAN2Q504Q3 1202 aaKnown RBP18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 NPAS4Q8IUM7 802 aa18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 ASIC4Q96FT7 647 aa18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 RPGRIP1Q96KN7 1286 aa18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 DIAPH3Q9NSV4 1193 aa18.98■□□□□ 0.63
APOBEC3F-203ENST00000476513 MARK3P27448 753 aa18.97■□□□□ 0.63
APOBEC3F-203ENST00000476513 MRPS6P82932 125 aaKnown RBP18.97■□□□□ 0.63
APOBEC3F-203ENST00000476513 PCNX4Q63HM2 1172 aa18.97■□□□□ 0.63
APOBEC3F-203ENST00000476513 ZFHX2Q9C0A1 2572 aaPredicted RBP18.97■□□□□ 0.63
APOBEC3F-203ENST00000476513 DOCK5Q9H7D0 1870 aa18.97■□□□□ 0.63
APOBEC3F-203ENST00000476513 AVPR2P30518 371 aa18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 XRRA1Q6P2D8 792 aa18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 NLRX1Q86UT6 975 aa18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 GIMAP8Q8ND71 665 aaPredicted RBP18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 ZBTB10Q96DT7 871 aa18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 FTHL17Q9BXU8 183 aa18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 ERAP1Q9NZ08 941 aa18.96■□□□□ 0.63
APOBEC3F-203ENST00000476513 GSTTP1A0A1W2PQM5 241 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 ATP9AO75110 1047 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 STAG3L1P0CL83 205 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 ATF7P17544 494 aaPredicted RBP18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 GATMP50440 423 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 RBM10P98175 930 aaKnown RBP18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 USP17L6PQ6QN14 398 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 VN1R2Q8NFZ6 395 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 PIBF1Q8WXW3 757 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 SEPT1Q8WYJ6 367 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 SUSD6Q92537 303 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 FAM49AQ9H0Q0 323 aaPredicted RBP18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 TLE6Q9H808 572 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 SENP2Q9HC62 589 aa18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 BAZ2BQ9UIF8 2168 aaKnown RBP18.95■□□□□ 0.62
APOBEC3F-203ENST00000476513 KMT2EQ8IZD2 1858 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 PER2O15055 1255 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 SCG2P13521 617 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 KCNA2P16389 499 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 IGBP1P78318 339 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 IER5Q5VY09 327 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 SMARCC2Q8TAQ2 1214 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 ATP8B4Q8TF62 1192 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 ATOH1Q92858 354 aaPredicted RBP18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 GLG1Q92896 1179 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 IRF2BPLQ9H1B7 796 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 PADI3Q9ULW8 664 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 SQORQ9Y6N5 450 aa18.94■□□□□ 0.62
APOBEC3F-203ENST00000476513 TROAPQ12815 778 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 PTPN21Q16825 1174 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 PLEKHM2Q8IWE5 1019 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 MICAL1Q8TDZ2 1067 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 GPRASP2Q96D09 838 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 SMARCAD1Q9H4L7 1026 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 TRPV2Q9Y5S1 764 aa18.93■□□□□ 0.62
APOBEC3F-203ENST00000476513 USP34Q70CQ2 3546 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 KAT6AQ92794 2004 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 RRN3P2A6NIE6 340 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 HIP1O00291 1037 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 MEIS2O14770 477 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 IFIT3O14879 490 aaKnown RBP18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 RPLP2P05387 115 aaKnown RBP18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 INSRRP14616 1297 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 TMEM62Q0P6H9 643 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 CUL5Q93034 780 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 OSBPL3Q9H4L5 887 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 KIAA1671Q9BY89 1806 aa18.92■□□□□ 0.62
APOBEC3F-203ENST00000476513 PTPRZ1P23471 2315 aaPredicted RBP18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 PIK3CDO00329 1044 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 ITGB5P18084 799 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 UBE3AQ05086 875 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 PAK2Q13177 524 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 DUSP6Q16828 381 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 CDHR1Q96JP9 859 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 IL25Q9H293 177 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 TLR9Q9NR96 1032 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 PKD2L1Q9P0L9 805 aa18.91■□□□□ 0.62
APOBEC3F-203ENST00000476513 LRFN2Q9ULH4 789 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms