RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 TMEM31Q5JXX7 168 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 GLG1Q92896 1179 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 VWCEQ96DN2 955 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 RNPEPQ9H4A4 650 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 SH3GLB2Q9NR46 395 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
NUDCD3-206ENST00000475952 GSTTP1A0A1W2PQM5 241 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 TREHO43280 583 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 CAND2O75155 1236 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 CDKL5O76039 1030 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 CXCL10P02778 98 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 CYP3A4P08684 503 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 ATP2A2P16615 1042 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 THPOP40225 353 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 KCNJ6P48051 423 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 STK3Q13188 491 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 HIC1Q14526 733 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 ANKRD1Q15327 319 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 TRIM71Q2Q1W2 868 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 ZNF618Q5T7W0 954 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 CYP2W1Q8TAV3 490 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 WNT8BQ93098 351 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 SMARCAD1Q9H4L7 1026 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 AGO4Q9HCK5 861 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 SETD4Q9NVD3 440 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 PCDHA11Q9Y5I1 949 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 MTCH2Q9Y6C9 303 aa12.96□□□□□ -0.33
NUDCD3-206ENST00000475952 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 MEIS1O00470 390 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 ARP10275 920 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 POU3F3P20264 500 aaPredicted RBP12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 MARK3P27448 753 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 NLRP5P59047 1200 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 PLA2G4DQ86XP0 818 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 TNPO1Q92973 898 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 SLKQ9H2G2 1235 aaPredicted RBP12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 TCEAL9Q9UHQ7 104 aa12.95□□□□□ -0.34
NUDCD3-206ENST00000475952 IGLV3-22A0A075B6J6 115 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 FAM86B1E9PN63 330 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 RFXAPO00287 272 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 TLL1O43897 1013 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 GPR37L1O60883 481 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 NBNO60934 754 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 EFCAB14O75071 495 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 LGR5O75473 907 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 FAM86B2P0C5J1 330 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 ACTR2P61160 394 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 SCRN1Q12765 414 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 ITGB3BPQ13352 177 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 TAF2Q6P1X5 1199 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 RASGRP4Q8TDF6 673 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 PCDHA4Q9UN74 947 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 TTC3P53804 2025 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 KIAA1671Q9BY89 1806 aa12.94□□□□□ -0.34
NUDCD3-206ENST00000475952 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 EPOPA6NHQ4 379 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 DDX39AO00148 427 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 RPLP2P05387 115 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 CTSHP09668 335 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 XBP1P17861 261 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 SLC26A2P50443 739 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 WDR5P61964 334 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 ADAM17P78536 824 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 IKBKEQ14164 716 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 GRIK4Q16099 956 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 KRT40Q6A162 431 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 IL17RAQ96F46 866 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 ZNF577Q9BSK1 485 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 TBC1D22BQ9NU19 505 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 COG5Q9UP83 839 aa12.93□□□□□ -0.34
NUDCD3-206ENST00000475952 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
NUDCD3-206ENST00000475952 RRN3P2A6NIE6 340 aa12.92□□□□□ -0.34
NUDCD3-206ENST00000475952 ADAMTS3O15072 1205 aa12.92□□□□□ -0.34
NUDCD3-206ENST00000475952 PFKFB2O60825 505 aa12.92□□□□□ -0.34
NUDCD3-206ENST00000475952 CA3P07451 260 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms