RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-223ENST00000475732 CHMP2AO43633 222 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 PSAPP07602 524 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 OR52Z1P0C646 297 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 SUPT20HL2P0C7V6 817 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 TXKP42681 527 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 PTGDRQ13258 359 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
DMD-223ENST00000475732 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
DMD-223ENST00000475732 MIS18BP1Q6P0N0 1132 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 B3GNT9Q6UX72 402 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 MIER3Q7Z3K6 550 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 RDM1Q8NG50 284 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
DMD-223ENST00000475732 GLG1Q92896 1179 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 SEZ6LQ9BYH1 1024 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 UNC45AQ9H3U1 944 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 SMARCAD1Q9H4L7 1026 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 TUT1Q9H6E5 874 aaKnown RBP11.29□□□□□ -0.6
DMD-223ENST00000475732 TTC12Q9H892 705 aaPredicted RBP11.29□□□□□ -0.6
DMD-223ENST00000475732 DISC1Q9NRI5 854 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 ZNF215Q9UL58 517 aaPredicted RBP11.29□□□□□ -0.6
DMD-223ENST00000475732 CEP131Q9UPN4 1083 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 EMSYQ7Z589 1322 aa11.29□□□□□ -0.6
DMD-223ENST00000475732 IGKV6D-21A0A0A0MT36 114 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 BACH1O14867 736 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 LGR5O75473 907 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 BRD1O95696 1058 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 BMP15O95972 392 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 F2P00734 622 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 PRPHP41219 470 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 PSEN2P49810 448 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 STAT5BP51692 787 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 CHMP4BP1P59074 171 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 PSMC6P62333 389 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
DMD-223ENST00000475732 KIAA0753Q2KHM9 967 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 TMEM266Q2M3C6 531 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 FAM160B1Q5W0V3 765 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 FAM173BQ6P4H8 233 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 PLPPR4Q7Z2D5 763 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 C4orf32Q8N8J7 132 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 KAT2BQ92831 832 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 ZNF396Q96N95 335 aaPredicted RBP11.28□□□□□ -0.6
DMD-223ENST00000475732 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 ERAP1Q9NZ08 941 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 ALPK3Q96L96 1907 aa11.28□□□□□ -0.6
DMD-223ENST00000475732 DNAH12Q6ZR08 3092 aa11.27□□□□□ -0.6
DMD-223ENST00000475732 ARVCFO00192 962 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 HAS3O00219 553 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 TECP42680 631 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 RGS19P49795 217 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 SLC26A2P50443 739 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 NUCB2P80303 420 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
DMD-223ENST00000475732 SPIRE1Q08AE8 756 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 MFSD10Q14728 455 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 SNX17Q15036 470 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 NBPF20Q3BBV1 942 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
DMD-223ENST00000475732 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 NFRKBQ6P4R8 1299 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 CCDC60Q8IWA6 550 aaPredicted RBP11.27□□□□□ -0.61
DMD-223ENST00000475732 SLC43A3Q8NBI5 491 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 AFAP1L1Q8TED9 768 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 PCYT2Q99447 389 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 RAB34Q9BZG1 259 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 ZDHHC9Q9Y397 364 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 MROH7Q68CQ1 1323 aa11.27□□□□□ -0.61
DMD-223ENST00000475732 TRIP12Q14669 1992 aaPredicted RBP11.27□□□□□ -0.61
DMD-223ENST00000475732 EML1O00423 815 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 DDIT3P35638 169 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 CDK7P50613 346 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 CEBPZQ03701 1054 aaKnown RBP11.26□□□□□ -0.61
DMD-223ENST00000475732 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
DMD-223ENST00000475732 PDIA5Q14554 519 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 EPHA7Q15375 998 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 LRRC26Q2I0M4 334 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 FAM47CQ5HY64 1035 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 PDXDC2PQ6P474 469 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 DTHD1Q6ZMT9 781 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 C7orf31Q8N865 590 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 TNPO1Q92973 898 aaKnown RBP11.26□□□□□ -0.61
DMD-223ENST00000475732 ATP6V0A1Q93050 837 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 USP28Q96RU2 1077 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
DMD-223ENST00000475732 ATP6V1DQ9Y5K8 247 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms