RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CDHR1Q96JP9 859 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ANO3Q9BYT9 981 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 IFIH1Q9BYX4 1025 aaKnown RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 SMARCAD1Q9H4L7 1026 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 AGO3Q9H9G7 860 aaKnown RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 AGO4Q9HCK5 861 aaKnown RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 JPH1Q9HDC5 661 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 CD320Q9NPF0 282 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 BARHL2Q9NY43 387 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ERAP1Q9NZ08 941 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 LMCD1Q9NZU5 365 aa8.04□□□□□ -1.12
HDAC3-207ENST00000475549 ZNF215Q9UL58 517 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-207ENST00000475549 PRRC2BQ5JSZ5 2229 aaKnown RBP8.03□□□□□ -1.12
HDAC3-207ENST00000475549 IGLV3-22A0A075B6J6 115 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 IGKV6D-21A0A0A0MT36 114 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 KLF18A0A0U1RQI7 1052 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 SPDYE4A6NLX3 237 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 PPFIA3O75145 1194 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 CDC45O75419 566 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 HSPA4P34932 840 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 SREBF1P36956 1147 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 NAPAP54920 295 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 IGBP1P78318 339 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 PLCB4Q15147 1175 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 NTRK3Q16288 839 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 FBXO47Q5MNV8 452 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 TAF2Q6P1X5 1199 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 Q6ZUG5 572 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 TRAPPC12Q8WVT3 735 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 LINC01599Q8WXQ3 324 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC3-207ENST00000475549 UIMC1Q96RL1 719 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 TSPYL2Q9H2G4 693 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-207ENST00000475549 RC3H2Q9HBD1 1191 aaKnown RBP8.03□□□□□ -1.12
HDAC3-207ENST00000475549 RBM28Q9NW13 759 aaKnown RBP8.03□□□□□ -1.12
HDAC3-207ENST00000475549 SLC9A2Q9UBY0 812 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 RAPGEFL1Q9UHV5 662 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 TUBE1Q9UJT0 475 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 COG5Q9UP83 839 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 SNX14Q9Y5W7 946 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 KIAA1217Q5T5P2 1943 aa8.03□□□□□ -1.12
HDAC3-207ENST00000475549 GOLGA8AA7E2F4 631 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 GOLGA8BA8MQT2 603 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 ZBTB42B2RXF5 422 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 H3BNC9 293 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 FOSP01100 380 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-207ENST00000475549 ATP4AP20648 1035 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 CD52P31358 61 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 STAT5BP51692 787 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 ADCY7P51828 1080 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 RCAN1P53805 252 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 TMEM62Q0P6H9 643 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 PFKFB3Q16875 520 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-207ENST00000475549 AAK1Q2M2I8 961 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 JAKMIP3Q5VZ66 844 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 PPP1R18Q6NYC8 613 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 ABHD15Q6UXT9 468 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 PLPPR4Q7Z2D5 763 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 TMEM192Q8IY95 271 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 FBXL16Q8N461 479 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 FBXO22Q8NEZ5 403 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-207ENST00000475549 APBB2Q92870 758 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 BRF1Q92994 677 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF689Q96CS4 500 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-207ENST00000475549 IL17RAQ96F46 866 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 JAKMIP1Q96N16 626 aaKnown RBP8.02□□□□□ -1.13
HDAC3-207ENST00000475549 YME1L1Q96TA2 773 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 AGXT2Q9BYV1 514 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 ZMYND12Q9H0C1 365 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 FAM49AQ9H0Q0 323 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-207ENST00000475549 TMX1Q9H3N1 280 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 EPHX3Q9H6B9 360 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 CDHR5Q9HBB8 845 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 PCDHA2Q9Y5H9 948 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 CDY2AQ9Y6F7 541 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 GBF1Q92538 1859 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 TANC1Q9C0D5 1861 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 NFASCO94856 1347 aa8.02□□□□□ -1.13
HDAC3-207ENST00000475549 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 DDX39AO00148 427 aaKnown RBP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 PRPF3O43395 683 aaKnown RBP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 CYP3A4P08684 503 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 HMGB1P09429 215 aaKnown RBP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 SCG2P13521 617 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 BMPR1AP36894 532 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 METAP2P50579 478 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 EVCP57679 992 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 MRPS6P82932 125 aaKnown RBP8.01□□□□□ -1.13
HDAC3-207ENST00000475549 AP3B2Q13367 1082 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 GPM6BQ13491 265 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 CAMK1Q14012 370 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 KRT32Q14532 448 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 COL19A1Q14993 1142 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 MTHFD1LQ6UB35 978 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 TEX2Q8IWB9 1127 aa8.01□□□□□ -1.13
HDAC3-207ENST00000475549 KIAA0319LQ8IZA0 1049 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms