RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ZNF689Q96CS4 500 aaPredicted RBP23.53■■□□□ 1.36
VPS36-203ENST00000475375 CDHR1Q96JP9 859 aa23.53■■□□□ 1.36
VPS36-203ENST00000475375 DGKIO75912 1065 aa23.52■■□□□ 1.36
VPS36-203ENST00000475375 MRPS6P82932 125 aaKnown RBP23.52■■□□□ 1.36
VPS36-203ENST00000475375 HERC4Q5GLZ8 1057 aaPredicted RBP23.52■■□□□ 1.36
VPS36-203ENST00000475375 CTCFLQ8NI51 663 aaPredicted RBP23.52■■□□□ 1.36
VPS36-203ENST00000475375 GPRASP2Q96D09 838 aa23.52■■□□□ 1.36
VPS36-203ENST00000475375 FAM49AQ9H0Q0 323 aaPredicted RBP23.52■■□□□ 1.36
VPS36-203ENST00000475375 PLAGL2Q9UPG8 496 aa23.52■■□□□ 1.36
VPS36-203ENST00000475375 MRPL42Q9Y6G3 142 aaKnown RBP23.52■■□□□ 1.36
VPS36-203ENST00000475375 E7EWF7 191 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 ATP9AO75110 1047 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 CD52P31358 61 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 ADAM15Q13444 863 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 PAN2Q504Q3 1202 aaKnown RBP23.51■■□□□ 1.35
VPS36-203ENST00000475375 RUFY2Q8WXA3 655 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 SMARCAD1Q9H4L7 1026 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 ATG2AQ2TAZ0 1938 aa23.51■■□□□ 1.35
VPS36-203ENST00000475375 GSTTP1A0A1W2PQM5 241 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 PIK3CDO00329 1044 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 MEIS2O14770 477 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 KCNA2P16389 499 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 KIF5BP33176 963 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 PTH1RQ03431 593 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 ZBTB10Q96DT7 871 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 MYL10Q9BUA6 226 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 SPZ1Q9BXG8 430 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 AGO3Q9H9G7 860 aaKnown RBP23.5■■□□□ 1.35
VPS36-203ENST00000475375 TAF6LQ9Y6J9 622 aa23.5■■□□□ 1.35
VPS36-203ENST00000475375 MBLAC1A4D2B0 266 aaPredicted RBP23.49■■□□□ 1.35
VPS36-203ENST00000475375 M0QZ92 97 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 ITGB1P05556 798 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 IBSPP21815 317 aaPredicted RBP23.49■■□□□ 1.35
VPS36-203ENST00000475375 MTMR1Q13613 665 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 MARCH8Q5T0T0 291 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 IER5Q5VY09 327 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 NPAS4Q8IUM7 802 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 CMTR2Q8IYT2 770 aaKnown RBP23.49■■□□□ 1.35
VPS36-203ENST00000475375 EDAQ92838 391 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 P2RX5Q93086 422 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 PSTPIP2Q9H939 334 aa23.49■■□□□ 1.35
VPS36-203ENST00000475375 STAG3L1P0CL83 205 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 ITGB5P18084 799 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 DNAJB1P25685 340 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 TMEM62Q0P6H9 643 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 CAMK1Q14012 370 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 NAALADL2Q58DX5 795 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 ADGRD2Q7Z7M1 963 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 ZNF654Q8IZM8 581 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 LINC01599Q8WXQ3 324 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 FTHL17Q9BXU8 183 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 TRPC6Q9Y210 931 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 TTC3P53804 2025 aa23.48■■□□□ 1.35
VPS36-203ENST00000475375 RRN3P2A6NIE6 340 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 DDAH1O94760 285 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 RPLP2P05387 115 aaKnown RBP23.47■■□□□ 1.35
VPS36-203ENST00000475375 INSRRP14616 1297 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 NRIP1P48552 1158 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 ANTXR2P58335 489 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 PAK2Q13177 524 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 RBM23Q86U06 439 aaKnown RBP23.47■■□□□ 1.35
VPS36-203ENST00000475375 KLHL23Q8NBE8 558 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 SPPL3Q8TCT6 385 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 IGDCC4Q8TDY8 1250 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 AZI2Q9H6S1 392 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 LRFN2Q9ULH4 789 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 ZNF318Q5VUA4 2279 aa23.47■■□□□ 1.35
VPS36-203ENST00000475375 SPDYE3A6NKU9 549 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 PPFIA3O75145 1194 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 UBE2SQ16763 222 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 NFXL1Q6ZNB6 911 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 RTN4RL1Q86UN2 441 aaPredicted RBP23.46■■□□□ 1.35
VPS36-203ENST00000475375 EFHBQ8N7U6 833 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 POF1BQ8WVV4 589 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 MSLNLQ96KJ4 702 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 MAP3K14Q99558 947 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 LZTS2Q9BRK4 669 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 TRPV2Q9Y5S1 764 aa23.46■■□□□ 1.35
VPS36-203ENST00000475375 PLEKHA8P1O95397 391 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 EYA4O95677 639 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 SCG2P13521 617 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 GSPT1P15170 499 aaKnown RBP23.45■■□□□ 1.34
VPS36-203ENST00000475375 TTC22Q5TAA0 569 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 CASC1Q6TDU7 716 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 MICAL1Q8TDZ2 1067 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 TNPO1Q92973 898 aaKnown RBP23.45■■□□□ 1.34
VPS36-203ENST00000475375 PBXIP1Q96AQ6 731 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 LY9Q9HBG7 655 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 JPH1Q9HDC5 661 aaPredicted RBP23.45■■□□□ 1.34
VPS36-203ENST00000475375 CLEC1BQ9P126 229 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 PADI3Q9ULW8 664 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 UBIAD1Q9Y5Z9 338 aa23.45■■□□□ 1.34
VPS36-203ENST00000475375 TMEM221A6NGB7 291 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 M0R296 226 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 SMARCA1P28370 1054 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 GNAQP50148 359 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 GATMP50440 423 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 SPOUT1Q5T280 376 aaKnown RBP23.44■■□□□ 1.34
VPS36-203ENST00000475375 TRIM67Q6ZTA4 783 aa23.44■■□□□ 1.34
VPS36-203ENST00000475375 SUGP1Q8IWZ8 645 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms