RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 LRRC55Q6ZSA7 311 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 CCDC25Q86WR0 208 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 CXorf56Q9H5V9 222 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 CEP72Q9P209 647 aa13.21□□□□□ -0.29
SKIV2L-208ENST00000474839 CETN3O15182 167 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 GFPT2O94808 682 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 NOL4O94818 638 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 LRRC63Q05C16 580 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 RNF10Q8N5U6 811 aaKnown RBP13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 MGARPQ8TDB4 240 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 BCAS3Q9H6U6 928 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 GDF3Q9NR23 364 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 TSKSQ9UJT2 592 aa13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.3
SKIV2L-208ENST00000474839 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 PPP1R2P41236 205 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 SKOR1P84550 965 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 PDE6BP35913 854 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 GLE1Q53GS7 698 aaKnown RBP13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 CCDC65Q8IXS2 484 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 NOC2LQ9Y3T9 749 aaKnown RBP13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 COL16A1Q07092 1604 aaPredicted RBP13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 NUP188Q5SRE5 1749 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 NF2P35240 595 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 PLTPP55058 493 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 ADCY1Q08828 1119 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 NFIXQ14938 502 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 ARHGAP44Q17R89 818 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 MEI1Q5TIA1 1274 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 ZNF571Q7Z3V5 609 aaPredicted RBP13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 SUGP1Q8IWZ8 645 aaKnown RBP13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 ARFGAP2Q8N6H7 521 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 PSMD1Q99460 953 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 SLC40A1Q9NP59 571 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 HDAC9Q9UKV0 1011 aa13.2□□□□□ -0.3
SKIV2L-208ENST00000474839 BCL9O00512 1426 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 HMGB1P1B2RPK0 211 aaPredicted RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 OPLAHO14841 1288 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 KIF4AO95239 1232 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 CPP00450 1065 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 FGGP02679 453 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 PPP1R7Q15435 360 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 PVALEFA0A1B0GWK0 134 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 CLTAP09496 248 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 EPB41P11171 864 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 FAM133BQ5BKY9 247 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 CACNA2D3Q8IZS8 1091 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 LRRC45Q96CN5 670 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 MLXIPLQ9NP71 852 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 ARMCX3Q9UH62 379 aaPredicted RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 GLI3P10071 1580 aa13.19□□□□□ -0.3
SKIV2L-208ENST00000474839 PPP1R12BO60237 982 aaPredicted RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 FAM107AO95990 144 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 EXOC3L4Q17RC7 722 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 CCDC38Q502W7 563 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 GLG1Q92896 1179 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 ZNF287Q9HBT7 754 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 OSGEPQ9NPF4 335 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 STK17AQ9UEE5 414 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 CASP5P51878 434 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 N4BP2L2Q92802 583 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms