RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 KCNA2P16389 499 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 RXRAP19793 462 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC78-209ENST00000474647 LTBRP36941 435 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 DLX2Q07687 328 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-209ENST00000474647 HYAL1Q12794 435 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 MTMR1Q13613 665 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 UBE2SQ16763 222 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 FBXO47Q5MNV8 452 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 TSHZ1Q6ZSZ6 1077 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
CCDC78-209ENST00000474647 SEPT1Q8WYJ6 367 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 ZBTB10Q96DT7 871 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 CDHR1Q96JP9 859 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 FAM49AQ9H0Q0 323 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-209ENST00000474647 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 ALG13Q9NP73 1137 aaKnown RBP16.07■□□□□ 0.16
CCDC78-209ENST00000474647 PIEZO1Q92508 2521 aa16.07■□□□□ 0.16
CCDC78-209ENST00000474647 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 ENPP3O14638 875 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 TBX10O75333 385 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 IBSPP21815 317 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-209ENST00000474647 IRS1P35568 1242 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 MRPS6P82932 125 aaKnown RBP16.06■□□□□ 0.16
CCDC78-209ENST00000474647 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 PAN2Q504Q3 1202 aaKnown RBP16.06■□□□□ 0.16
CCDC78-209ENST00000474647 CLP1Q92989 425 aaKnown RBP16.06■□□□□ 0.16
CCDC78-209ENST00000474647 SMARCAD1Q9H4L7 1026 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 PSTPIP2Q9H939 334 aa16.06■□□□□ 0.16
CCDC78-209ENST00000474647 TECTAO75443 2155 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 hCG_1642624A0A1W2PR95 340 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 POTEB3A0JP26 581 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 SPDYE3A6NKU9 549 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 M0QZ92 97 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 LINC01565O15544 149 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 MBTPS2O43462 519 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 PRC1O43663 620 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 MMP1P03956 469 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 ITGB5P18084 799 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 CD52P31358 61 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 SMAD2Q15796 467 aaKnown RBP16.05■□□□□ 0.16
CCDC78-209ENST00000474647 POTEBQ6S5H4 581 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
CCDC78-209ENST00000474647 LINC01599Q8WXQ3 324 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 ZNF689Q96CS4 500 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-209ENST00000474647 MAP3K14Q99558 947 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 POP1Q99575 1024 aaKnown RBP16.05■□□□□ 0.16
CCDC78-209ENST00000474647 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
CCDC78-209ENST00000474647 TRPC6Q9Y210 931 aa16.05■□□□□ 0.16
CCDC78-209ENST00000474647 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
CCDC78-209ENST00000474647 MBLAC1A4D2B0 266 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-209ENST00000474647 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 SGSM2O43147 1006 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 DGKIO75912 1065 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 NDUFV1P49821 464 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 GNAQP50148 359 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 SMAD4Q13485 552 aaKnown RBP16.04■□□□□ 0.16
CCDC78-209ENST00000474647 CTC1Q2NKJ3 1217 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 MARCH8Q5T0T0 291 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 AGO3Q9H9G7 860 aaKnown RBP16.04■□□□□ 0.16
CCDC78-209ENST00000474647 JPH1Q9HDC5 661 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-209ENST00000474647 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 CD207Q9UJ71 328 aa16.04■□□□□ 0.16
CCDC78-209ENST00000474647 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
CCDC78-209ENST00000474647 INSRRP14616 1297 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 SMARCA1P28370 1054 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 PAK2Q13177 524 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 IER5Q5VY09 327 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 HFE2Q6ZVN8 426 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 HEATR3Q7Z4Q2 680 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 TRAPPC12Q8WVT3 735 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 PLVAPQ9BX97 442 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 AZI2Q9H6S1 392 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 SLC9A2Q9UBY0 812 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 TRPV2Q9Y5S1 764 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 UBIAD1Q9Y5Z9 338 aa16.03■□□□□ 0.16
CCDC78-209ENST00000474647 STXBP3O00186 592 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 SH2B2O14492 632 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-209ENST00000474647 RPLP2P05387 115 aaKnown RBP16.02■□□□□ 0.16
CCDC78-209ENST00000474647 MCM5P33992 734 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 ADGRD2Q7Z7M1 963 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 CMTR2Q8IYT2 770 aaKnown RBP16.02■□□□□ 0.16
CCDC78-209ENST00000474647 MAP4K1Q92918 833 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 FBXL18Q96ME1 805 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 FTHL17Q9BXU8 183 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 JADE2Q9NQC1 790 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 PLAGL2Q9UPG8 496 aa16.02■□□□□ 0.16
CCDC78-209ENST00000474647 RRN3P2A6NIE6 340 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 ITGB1P05556 798 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 STAG3L1P0CL83 205 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms